RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TFR2Q9UP52 801 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 ERLIN1O75477 346 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 RHOXF2BP0C7M4 288 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 IL1R1P14778 569 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 GNA11P29992 359 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 NAPAP54920 295 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 PNMA5Q96PV4 448 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 RHOXF2Q9BQY4 288 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 ADAM21Q9UKJ8 722 aa13.9□□□□□ -0.18
BEST3-201ENST00000266661 ZNF263O14978 683 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
BEST3-201ENST00000266661 BTDP43251 543 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
BEST3-201ENST00000266661 EHHADHQ08426 723 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 MUM1L1Q5H9M0 696 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 ZNF804AQ7Z570 1209 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 TXLNBQ8N3L3 684 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 TBCKQ8TEA7 893 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 MMS19Q96T76 1030 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 GBP3Q9H0R5 595 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
BEST3-201ENST00000266661 ZNF287Q9HBT7 754 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 CD209Q9NNX6 404 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 SIK3Q9Y2K2 1263 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 GAKO14976 1311 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 PLIN4Q96Q06 1357 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 H0YIN7 160 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 PDE6BP35913 854 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 GPSM2P81274 684 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 CASP8Q14790 479 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 JAKMIP2Q96AA8 810 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
BEST3-201ENST00000266661 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
BEST3-201ENST00000266661 PIGSQ96S52 555 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
BEST3-201ENST00000266661 ANO9A1A5B4 782 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 MYMKA6NI61 221 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 ENC1O14682 589 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 LCA5LO95447 670 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
BEST3-201ENST00000266661 TECP42680 631 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 GYS2P54840 703 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 ASIC1P78348 528 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 AMPD3Q01432 767 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
BEST3-201ENST00000266661 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 PLAGL2Q9UPG8 496 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 ABCB11O95342 1321 aa13.88□□□□□ -0.19
BEST3-201ENST00000266661 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
BEST3-201ENST00000266661 IGKV6D-41A0A0C4DH26 115 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 KLRG2A4D1S0 409 aaPredicted RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 LRRIQ3A6PVS8 624 aaPredicted RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 TULP2O00295 520 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 N4BP1O75113 896 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 TGFB2P61812 414 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 MCM6Q14566 821 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 CRY2Q49AN0 593 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 UNC13DQ70J99 1090 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 EHBP1Q8NDI1 1231 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 CCDC47Q96A33 483 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 TMEM260Q9NX78 707 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 USP17L5A8MUK1 530 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 PDE2AO00408 941 aaPredicted RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 KRT86O43790 486 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 YBX3P16989 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
BEST3-201ENST00000266661 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 AARSP49588 968 aaKnown RBP eCLIP13.87□□□□□ -0.19
BEST3-201ENST00000266661 VAV2P52735 878 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 GABPAQ06546 454 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 EEF2KMTQ96G04 330 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
BEST3-201ENST00000266661 VIPAS39Q9H9C1 493 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms