RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 GNPATO15228 680 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 SLC16A2P36021 539 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 PAPD7Q5XG87 772 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 CCNI2Q6ZMN8 369 aaPredicted RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 CREG2Q8IUH2 290 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 TSEN2Q8NCE0 465 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
SQLE-201ENST00000265896 M0R2N6 131 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 WDR93Q6P2C0 686 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 CEP95Q96GE4 821 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 EYA3Q99504 573 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 NDST4Q9H3R1 872 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 KRT14P02533 472 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 SF3A3Q12874 501 aaKnown RBP eCLIP18.67■□□□□ 0.582e-7■■■■■ 43
SQLE-201ENST00000265896 GRM4Q14833 912 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 NONOQ15233 471 aaKnown RBP eCLIP18.67■□□□□ 0.58
SQLE-201ENST00000265896 MTMR8Q96EF0 704 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 CENPHQ9H3R5 247 aa18.67■□□□□ 0.58
SQLE-201ENST00000265896 GOLGA6CA6NDK9 693 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 MARCH6O60337 910 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 GOLGA6DP0CG33 693 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 ECM1Q16610 540 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 RBM12Q9NTZ6 932 aaKnown RBP18.66■□□□□ 0.58
SQLE-201ENST00000265896 GOLGA6AQ9NYA3 693 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
SQLE-201ENST00000265896 A0A1W2PQC6 194 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 PRPF6O94906 941 aaKnown RBP18.66■□□□□ 0.58
SQLE-201ENST00000265896 RASA1P20936 1047 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 MAGEA1P43355 309 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 SPATA4Q8NEY3 305 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 ZEB2O60315 1214 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 TAL1P17542 331 aaPredicted RBP18.66■□□□□ 0.58
SQLE-201ENST00000265896 VAV2P52735 878 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 BCORQ6W2J9 1755 aa18.66■□□□□ 0.58
SQLE-201ENST00000265896 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
SQLE-201ENST00000265896 MEA1Q16626 185 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
SQLE-201ENST00000265896 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 DISP2A7MBM2 1401 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 FAM153BP0C7A2 387 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 FAM153CQ494X1 144 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 OSBPL9Q96SU4 736 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 PACSIN1Q9BY11 444 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 ACBD3Q9H3P7 528 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 FAM153AQ9UHL3 310 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 SNX12Q9UMY4 172 aa18.65■□□□□ 0.58
SQLE-201ENST00000265896 LIG3P49916 1009 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 GRB10Q13322 594 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 KCNB1Q14721 858 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 VWA3BQ502W6 1294 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 PACS2Q86VP3 889 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 DHTKD1Q96HY7 919 aaPredicted RBP18.64■□□□□ 0.57
SQLE-201ENST00000265896 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 BCAS3Q9H6U6 928 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 BLOC1S4Q9NUP1 217 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 PSD3Q9NYI0 1048 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
SQLE-201ENST00000265896 BTDP43251 543 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 SV2BQ7L1I2 683 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 DGKHQ86XP1 1220 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
SQLE-201ENST00000265896 TRAF5O00463 557 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 TACC1O75410 805 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 CDK8P49336 464 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 PDCLQ13371 301 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 CALCRLQ16602 461 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 SLC30A10Q6XR72 485 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 DDX12PQ92771 950 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 CCDC47Q96A33 483 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 NFU1Q9UMS0 254 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 SNAP25P60880 206 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 TUBB2AQ13885 445 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 REXO1Q8N1G1 1221 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 PNMA5Q96PV4 448 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 PYM1Q9BRP8 204 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 TUBB2BQ9BVA1 445 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 MED4Q9NPJ6 270 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 CARSP49589 748 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 POLR2FP61218 127 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 CKAP4Q07065 602 aaKnown RBP18.63■□□□□ 0.57
SQLE-201ENST00000265896 MAP9Q49MG5 647 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 KLHL7Q8IXQ5 586 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 TEX11Q8IYF3 940 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 FAM76AQ8TAV0 307 aa18.63■□□□□ 0.57
SQLE-201ENST00000265896 PALM3A6NDB9 673 aaPredicted RBP18.62■□□□□ 0.57
SQLE-201ENST00000265896 USO1O60763 962 aaKnown RBP18.62■□□□□ 0.57
SQLE-201ENST00000265896 GNGT1P63211 74 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 EHHADHQ08426 723 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 MICALL1Q8N3F8 863 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms