RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MTRF1LQ9UGC7 380 aaKnown RBP18.8■□□□□ 0.6
SRF-201ENST00000265354 GGT7Q9UJ14 662 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CETN1Q12798 172 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 KRT25Q7Z3Z0 450 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 KIFC2Q96AC6 838 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 RASAL2Q9UJF2 1139 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 PTPN22Q9Y2R2 807 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CEMIPQ8WUJ3 1361 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 PPP1R3GB7ZBB8 358 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 DPYDQ12882 1025 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 EARS2Q5JPH6 523 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 HDAC7Q8WUI4 952 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 ARL8AQ96BM9 186 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 DDX47Q9H0S4 455 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 MLXIPLQ9NP71 852 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 DNAJC17Q9NVM6 304 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 MKRN4PQ13434 485 aaPredicted RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 TBC1D10BQ4KMP7 808 aaPredicted RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 FAM26FQ5R3K3 315 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 ANKRD40Q6AI12 368 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 GSTA5Q7RTV2 222 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 THOC1Q96FV9 657 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 GCNT3O95395 438 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 CARSP49589 748 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 FNBP4Q8N3X1 1017 aaPredicted RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 DHTKD1Q96HY7 919 aaPredicted RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 ATP6V0A2Q9Y487 856 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 FAM13AO94988 1023 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 EEF2P13639 858 aaKnown RBP18.79■□□□□ 0.6
SRF-201ENST00000265354 DIXDC1Q155Q3 683 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 GPBP1Q86WP2 473 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 PCDHA12Q9UN75 941 aa18.79■□□□□ 0.6
SRF-201ENST00000265354 PLEKHG1Q9ULL1 1385 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 A6NNZ2 444 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 FLOT1O75955 427 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 STK4Q13043 487 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 RBBP5Q15291 538 aaKnown RBP18.78■□□□□ 0.6
SRF-201ENST00000265354 TMEM132AQ24JP5 1023 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 TBC1D1Q86TI0 1168 aaPredicted RBP18.78■□□□□ 0.6
SRF-201ENST00000265354 KIAA1024Q9UPX6 916 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 POTEMA6NI47 508 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 SNCBQ16143 134 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 DDX42Q86XP3 938 aaKnown RBP eCLIP18.78■□□□□ 0.6
SRF-201ENST00000265354 SRBD1Q8N5C6 995 aaKnown RBP18.78■□□□□ 0.6
SRF-201ENST00000265354 ASIC3Q9UHC3 531 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 PCDHA4Q9UN74 947 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 CTNNA2P26232 953 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 SLC1A4P43007 532 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 CORO7P57737 925 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 USH1GQ495M9 461 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 PANK4Q9NVE7 773 aa18.78■□□□□ 0.6
SRF-201ENST00000265354 PCK1P35558 622 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 DENND2CQ68D51 928 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 TMTC3Q6ZXV5 915 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 PIGBQ92521 554 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
SRF-201ENST00000265354 EYA3Q99504 573 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 VWDEQ8N2E2 1590 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 A0A087X0B3 334 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 MEIS1O00470 390 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 ERMNQ8TAM6 284 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 ARMCX3Q9UH62 379 aaPredicted RBP18.77■□□□□ 0.6
SRF-201ENST00000265354 ANKARQ7Z5J8 1434 aa18.77■□□□□ 0.6
SRF-201ENST00000265354 CLIC2O15247 247 aa18.77■□□□□ 0.59
SRF-201ENST00000265354 PRDX5P30044 214 aa18.77■□□□□ 0.59
SRF-201ENST00000265354 ZBTB16Q05516 673 aa18.77■□□□□ 0.59
SRF-201ENST00000265354 MAN2A1Q16706 1144 aa18.77■□□□□ 0.59
SRF-201ENST00000265354 CALR3Q96L12 384 aaKnown RBP18.77■□□□□ 0.59
SRF-201ENST00000265354 AGXT2Q9BYV1 514 aa18.77■□□□□ 0.59
SRF-201ENST00000265354 RBM12Q9NTZ6 932 aaKnown RBP18.77■□□□□ 0.59
SRF-201ENST00000265354 ZNF18P17022 549 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 EMBQ6PCB8 327 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 DNAAF5Q86Y56 855 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 KIRREL3Q8IZU9 778 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 TMOD1P28289 359 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 VWA3BQ502W6 1294 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 SUSD4Q5VX71 490 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
SRF-201ENST00000265354 CYP2J2P51589 502 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 HNRNPLLQ8WVV9 542 aaKnown RBP18.76■□□□□ 0.59
SRF-201ENST00000265354 TSKSQ9UJT2 592 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 CPDO75976 1380 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 UTYO14607 1347 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 SPDYE3A6NKU9 549 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 SEMA3EO15041 775 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 ADCY7P51828 1080 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.593e-6■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms