RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 PTPN21Q16825 1174 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 CNNM4Q6P4Q7 775 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 NELFBQ8WX92 580 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 VPS16Q9H269 839 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 SLC39A2Q9NP94 309 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 SORBS3O60504 671 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 KIF20AO95235 890 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 GSDMDP57764 484 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.744e-7■■□□□ 14.2
SSR3-201ENST00000265044 CCDC65Q8IXS2 484 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 LPAR1Q92633 364 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 NID2Q14112 1375 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 ADAMTS3O15072 1205 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SLC37A4O43826 429 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 ATP1A3P13637 1013 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 CCDC40Q4G0X9 1142 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 NCAPG2Q86XI2 1143 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 IGKV6D-41A0A0C4DH26 115 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SKILP12757 684 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 CHMP4BP1P59074 171 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SPAG1Q07617 926 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SNRNP48Q6IEG0 339 aaKnown RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 CSGALNACT2Q8N6G5 542 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SMCR8Q8TEV9 937 aaPredicted RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 FUCA2Q9BTY2 467 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 BACH1O14867 736 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 SNHG28P0DPA3 235 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 STAT3P40763 770 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 JAG1P78504 1218 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 DGKZQ13574 1117 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 RRP1BQ14684 758 aaKnown RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 SCYL3Q8IZE3 742 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 TBC1D5Q92609 795 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 CTAGE1Q96RT6 745 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 ADARB2Q9NS39 739 aaKnown RBP10.42□□□□□ -0.74
SSR3-201ENST00000265044 GDAQ9Y2T3 454 aa10.42□□□□□ -0.74
SSR3-201ENST00000265044 KDM3AQ9Y4C1 1321 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 FAM13AO94988 1023 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
SSR3-201ENST00000265044 PRPHP41219 470 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 USP11P51784 963 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 NPY5RQ15761 445 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 FKBP15Q5T1M5 1219 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 TCERG1LQ5VWI1 586 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 NELFCDQ8IXH7 590 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 SHISA4Q96DD7 197 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 TRERF1Q96PN7 1200 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 BICDL2A1A5D9 508 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 ACTN4O43707 911 aaKnown RBP10.41□□□□□ -0.74
SSR3-201ENST00000265044 MMP14P50281 582 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 SAMSN1Q9NSI8 373 aaKnown RBP10.41□□□□□ -0.74
SSR3-201ENST00000265044 RNF146Q9NTX7 359 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 MIER3Q7Z3K6 550 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 C17orf53Q8N3J3 647 aaPredicted RBP10.41□□□□□ -0.74
SSR3-201ENST00000265044 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 SRRTQ9BXP5 876 aaKnown RBP10.41□□□□□ -0.74
SSR3-201ENST00000265044 CUEDC2Q9H467 287 aa10.41□□□□□ -0.74
SSR3-201ENST00000265044 TRAF5O00463 557 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 ARMC9Q7Z3E5 817 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 MTMR14Q8NCE2 650 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 CCSER1Q9C0I3 900 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 POLD4Q9HCU8 107 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 ABCB11O95342 1321 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 POTECB2RU33 542 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 ADM5C9JUS6 153 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 E9PMD0 336 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 FZD9O00144 591 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 IKBKBO14920 756 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 TBC1D12O60347 775 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 PPP1R11O60927 126 aaPredicted RBP10.4□□□□□ -0.74
SSR3-201ENST00000265044 VCAM1P19320 739 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 BACE1P56817 501 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 UBXN1Q04323 297 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 LRMPQ12912 555 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 COG2Q14746 738 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 IQCB1Q15051 598 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 RBM43Q6ZSC3 357 aaKnown RBP10.4□□□□□ -0.74
SSR3-201ENST00000265044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms