RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-201ENST00000264555 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 AGTPBP1Q9UPW5 1226 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 TNNI1P19237 187 aa18.39■□□□□ 0.54
PHRF1-201ENST00000264555 SRGAP1Q7Z6B7 1085 aa18.39■□□□□ 0.54
PHRF1-201ENST00000264555 CROCCP2Q86T23 111 aa18.39■□□□□ 0.54
PHRF1-201ENST00000264555 TRIM31Q9BZY9 425 aa18.39■□□□□ 0.54
PHRF1-201ENST00000264555 ODR4Q5SWX8 454 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 SLC35F6Q8N357 371 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 WDR11Q9BZH6 1224 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 BUB1O43683 1085 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 DEPTORQ8TB45 409 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 GJA10Q969M2 543 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 LRRC41Q15345 812 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 KCNK9Q9NPC2 374 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 NMT2O60551 498 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 H2AFZP0C0S5 128 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 MTMR3Q13615 1198 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 TCP11X2Q5H9J9 407 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 H2AFVQ71UI9 128 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 IVNS1ABPQ9Y6Y0 642 aa18.39■□□□□ 0.53
PHRF1-201ENST00000264555 MROH1Q8NDA8 1641 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 HPDP32754 393 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-201ENST00000264555 STAT2P52630 851 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 ZNF577Q9BSK1 485 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 MAP2P11137 1827 aaKnown RBP18.38■□□□□ 0.53
PHRF1-201ENST00000264555 KCNK3O14649 394 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 CHGBP05060 677 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 GRM4Q14833 912 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-201ENST00000264555 BCS1LQ9Y276 419 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 UBE2SQ16763 222 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 ZBED6P86452 979 aa18.38■□□□□ 0.53
PHRF1-201ENST00000264555 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
PHRF1-201ENST00000264555 ABCB4P21439 1286 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
PHRF1-201ENST00000264555 MAIP1Q8WWC4 291 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 SREK1Q8WXA9 508 aaKnown RBP18.37■□□□□ 0.53
PHRF1-201ENST00000264555 SAMD15Q9P1V8 674 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 PPP2R5EQ16537 467 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 LONRF2Q1L5Z9 754 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 RAB17Q9H0T7 212 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 CSADQ9Y600 493 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 KRT31Q15323 416 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 ARMCX5Q6P1M9 558 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 SOWAHDA6NJG2 315 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 CCDC170Q8IYT3 715 aa18.37■□□□□ 0.53
PHRF1-201ENST00000264555 MMP10P09238 476 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 DCUN1D2Q6PH85 259 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 TMEM179Q6ZVK1 233 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 USP17L5A8MUK1 530 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 LRRC63Q05C16 580 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 DMP1Q13316 513 aaPredicted RBP18.36■□□□□ 0.53
PHRF1-201ENST00000264555 CUL4BQ13620 913 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 SLC17A8Q8NDX2 589 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 NACC1Q96RE7 527 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 ASIC3Q9UHC3 531 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 IGDCC4Q8TDY8 1250 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
PHRF1-201ENST00000264555 PLA2G4BP0C869 781 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 SHC4Q6S5L8 630 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 GLG1Q92896 1179 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 VTI1AQ96AJ9 217 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 NKIRAS1Q9NYS0 192 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 DDIT3P35638 169 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 PSMC2P35998 433 aaKnown RBP18.36■□□□□ 0.53
PHRF1-201ENST00000264555 LIG4P49917 911 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 RASSF7Q02833 373 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 DCAF4Q8WV16 495 aa18.36■□□□□ 0.53
PHRF1-201ENST00000264555 SNX16P57768 344 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
PHRF1-201ENST00000264555 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 KAZALD1Q96I82 304 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 FEZ2Q9UHY8 353 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-201ENST00000264555 ARID5BQ14865 1188 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 ANO3Q9BYT9 981 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-201ENST00000264555 KRIT1O00522 736 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 ORC2Q13416 577 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-201ENST00000264555 BRDTQ58F21 947 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-201ENST00000264555 ANKRD13CQ8N6S4 541 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 SLC44A5Q8NCS7 719 aa18.35■□□□□ 0.53
PHRF1-201ENST00000264555 NDUFAB1O14561 156 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 SLC8A3P57103 927 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
PHRF1-201ENST00000264555 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 CCDC93Q567U6 631 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 KCNB2Q92953 911 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 ZBTB5O15062 677 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 MFAP3LO75121 409 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 FERP16591 822 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 USP14P54578 494 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms