RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PDCLQ13371 301 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 KCNB1Q14721 858 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 PROCA1Q8NCQ7 364 aaPredicted RBP13.76□□□□□ -0.21
CHMP3-201ENST00000263856 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 CAPS2Q9BXY5 557 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
CHMP3-201ENST00000263856 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.75□□□□□ -0.21
CHMP3-201ENST00000263856 STXBP3O00186 592 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 HSF2BPO75031 334 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 MAGEA9P43362 315 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 BSDC1Q9NW68 430 aaPredicted RBP13.75□□□□□ -0.21
CHMP3-201ENST00000263856 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
CHMP3-201ENST00000263856 CNNM4Q6P4Q7 775 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 ARL8AQ96BM9 186 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 RPGRIP1Q96KN7 1286 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 JRKLQ9Y4A0 524 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 DCCP43146 1447 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 EBAG9O00559 213 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 KRT14P02533 472 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 SLC1A4P43007 532 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 TNNI2P48788 182 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 AMPD3Q01432 767 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 MEA1Q16626 185 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 TSEN2Q8NCE0 465 aaKnown RBP13.75□□□□□ -0.21
CHMP3-201ENST00000263856 COA7Q96BR5 231 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 PIGSQ96S52 555 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 VIPAS39Q9H9C1 493 aa13.75□□□□□ -0.21
CHMP3-201ENST00000263856 RBM12Q9NTZ6 932 aaKnown RBP13.75□□□□□ -0.21
CHMP3-201ENST00000263856 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 GTF2A1P52655 376 aaPredicted RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 VWA3BQ502W6 1294 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 NOC3LQ8WTT2 800 aaKnown RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 TTYH3Q9C0H2 523 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 SH2D4AQ9H788 454 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 SRP68Q9UHB9 627 aaKnown RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 SALL4Q9UJQ4 1053 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
CHMP3-201ENST00000263856 GUCY2DQ02846 1103 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 KLHL7Q8IXQ5 586 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 CCSER1Q9C0I3 900 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
CHMP3-201ENST00000263856 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
CHMP3-201ENST00000263856 TRAF5O00463 557 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
CHMP3-201ENST00000263856 EPS15P42566 896 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHMP3-201ENST00000263856 GNAQP50148 359 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 IRAK1P51617 712 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 RAPGEF1Q13905 1077 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 GRIK5Q16478 980 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
CHMP3-201ENST00000263856 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 MYMKA6NI61 221 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 SLC20A2Q08357 652 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHMP3-201ENST00000263856 GRM4Q14833 912 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 MAATS1Q7Z4T9 603 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 H0YHG0 523 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 TDP2O95551 362 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 CALCRLQ16602 461 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 MTMR8Q96EF0 704 aa13.73□□□□□ -0.21
CHMP3-201ENST00000263856 HPDP32754 393 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 CORO7P57737 925 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 POLR2FP61218 127 aaKnown RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 KRT12Q99456 494 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 STIM2Q9P246 746 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms