RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 KCTD16Q68DU8 428 aa15.64■□□□□ 0.09
SCARF1-201ENST00000263071 KANSL2Q9H9L4 492 aa15.64■□□□□ 0.09
SCARF1-201ENST00000263071 ABHD10Q9NUJ1 306 aa15.64■□□□□ 0.09
SCARF1-201ENST00000263071 EPN1Q9Y6I3 576 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-201ENST00000263071 EIF4E1BA6NMX2 242 aaKnown RBP15.63■□□□□ 0.09
SCARF1-201ENST00000263071 MYL1P05976 194 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 PRCPP42785 496 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 CUL3Q13618 768 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 NAA35Q5VZE5 725 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 MMRN2Q9H8L6 949 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 MCM9Q9NXL9 1143 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 CORO1CQ9ULV4 474 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-201ENST00000263071 TBX2Q13207 712 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-201ENST00000263071 DYMQ7RTS9 669 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 SGMS1Q86VZ5 419 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 MMS19Q96T76 1030 aa15.63■□□□□ 0.09
SCARF1-201ENST00000263071 ZNHIT6Q9NWK9 470 aaKnown RBP15.63■□□□□ 0.09
SCARF1-201ENST00000263071 SAP30BPQ9UHR5 308 aaKnown RBP15.63■□□□□ 0.09
SCARF1-201ENST00000263071 GOLGA8KD6RF30 607 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 MARCH6O60337 910 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 LETM2Q2VYF4 491 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 YIPF2Q9BWQ6 316 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 AGPAT5Q9NUQ2 364 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 SMNDC1O75940 238 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCARF1-201ENST00000263071 WHAMMP3Q1A5X7 153 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 TYW1BQ6NUM6 668 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 CYP26C1Q6V0L0 522 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 SYCP3Q8IZU3 236 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 CTAGE1Q96RT6 745 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 FAM167BQ9BTA0 163 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
SCARF1-201ENST00000263071 CSF1RP07333 972 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 PMS1P54277 932 aaKnown RBP15.62■□□□□ 0.09
SCARF1-201ENST00000263071 ASIC1P78348 528 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 DRP2Q13474 957 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 WDR93Q6P2C0 686 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 MIPOL1Q8TD10 442 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 NOD2Q9HC29 1040 aa15.62■□□□□ 0.09
SCARF1-201ENST00000263071 PPP1R3GB7ZBB8 358 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 ATP6V1G1O75348 118 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 PNMA8AQ86V59 439 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 ZNF473Q8WTR7 871 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 MYO1AQ9UBC5 1043 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 TCRBV5S4A2TA0A5A2 114 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 OPLAHO14841 1288 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 ANP32DO95626 131 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 RPN1P04843 607 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 MXRA7P84157 204 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 HIBCHQ6NVY1 386 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 CSGALNACT2Q8N6G5 542 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 TSPAN18Q96SJ8 248 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 PARP1P09874 1014 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 SLMAPQ14BN4 828 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 PPP1R7Q15435 360 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 TDRD12Q587J7 1177 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 MEX3CQ5U5Q3 659 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 RBM41Q96IZ5 413 aaKnown RBP15.61■□□□□ 0.09
SCARF1-201ENST00000263071 SELENOOQ9BVL4 669 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 TBC1D7Q9P0N9 293 aa15.61■□□□□ 0.09
SCARF1-201ENST00000263071 XDHP47989 1333 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 BUB1O43683 1085 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 KLRK1P26718 216 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 ERCC5P28715 1186 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 SRBD1Q8N5C6 995 aaKnown RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 C15orf41Q9Y2V0 281 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 WDR17Q8IZU2 1322 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 E7EVH7 732 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 NDUFA10O95299 355 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 PLEKP08567 350 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 CTCFP49711 727 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 SND1Q7KZF4 910 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 IFT81Q8WYA0 676 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 JAKMIP2Q96AA8 810 aa15.6■□□□□ 0.09
SCARF1-201ENST00000263071 GPR101Q96P66 508 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 TTF2Q9UNY4 1162 aaKnown RBP15.6■□□□□ 0.09
SCARF1-201ENST00000263071 CD151P48509 253 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
SCARF1-201ENST00000263071 CCDC70Q6NSX1 233 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 STAG2Q8N3U4 1231 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 CUL5Q93034 780 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 PANX2Q96RD6 677 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 GORASP1Q9BQQ3 440 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 AKR1B10O60218 316 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 RNF8O76064 485 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 KIF5BP33176 963 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 CAVIN4Q5BKX8 364 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 SLC51AQ86UW1 340 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 SAR1BQ9Y6B6 198 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms