RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
COPE-201ENST00000262812 HSD17B4P51659 736 aa21.31■■□□□ 1
COPE-201ENST00000262812 TRIM60Q495X7 471 aa21.31■■□□□ 1
COPE-201ENST00000262812 TMTC3Q6ZXV5 915 aa21.31■■□□□ 1
COPE-201ENST00000262812 FCHSD1Q86WN1 690 aa21.31■■□□□ 1
COPE-201ENST00000262812 PCSK9Q8NBP7 692 aaKnown RBP21.31■■□□□ 1
COPE-201ENST00000262812 CTAGE5O15320 804 aa21.3■■□□□ 1
COPE-201ENST00000262812 RPS6KB1P23443 525 aa21.3■■□□□ 1
COPE-201ENST00000262812 PSMA5P28066 241 aa21.3■■□□□ 1
COPE-201ENST00000262812 APOBRQ0VD83 1088 aa21.3■■□□□ 1
COPE-201ENST00000262812 RTN1Q16799 776 aa21.3■■□□□ 1
COPE-201ENST00000262812 SEPT14Q6ZU15 432 aa21.3■■□□□ 1
COPE-201ENST00000262812 BRF1Q92994 677 aa21.3■■□□□ 1
COPE-201ENST00000262812 IWS1Q96ST2 819 aa21.3■■□□□ 1
COPE-201ENST00000262812 STARD7Q9NQZ5 370 aa21.3■■□□□ 1
COPE-201ENST00000262812 PXMP2Q9NR77 195 aa21.3■■□□□ 1
COPE-201ENST00000262812 RBM47A0AV96 593 aaKnown RBP21.29■■□□□ 1
COPE-201ENST00000262812 MOXD2PA6NHM9 499 aa21.29■■□□□ 1
COPE-201ENST00000262812 GOLGA8AA7E2F4 631 aa21.29■■□□□ 1
COPE-201ENST00000262812 GOLGA8BA8MQT2 603 aa21.29■■□□□ 1
COPE-201ENST00000262812 MYCLP12524 364 aaPredicted RBP21.29■■□□□ 1
COPE-201ENST00000262812 CST5P28325 142 aaPredicted RBP21.29■■□□□ 1
COPE-201ENST00000262812 STXBP2Q15833 593 aa21.29■■□□□ 1
COPE-201ENST00000262812 FSCN1Q16658 493 aaKnown RBP21.29■■□□□ 1
COPE-201ENST00000262812 DUSP28Q4G0W2 176 aa21.29■■□□□ 1
COPE-201ENST00000262812 MAP3K20Q9NYL2 800 aaKnown RBP21.29■■□□□ 1
COPE-201ENST00000262812 FRMPD3Q5JV73 1810 aa21.29■■□□□ 1
COPE-201ENST00000262812 NR3C2P08235 984 aa21.28■■□□□ 1
COPE-201ENST00000262812 TXNP10599 105 aaKnown RBP21.28■■□□□ 1
COPE-201ENST00000262812 TLE2Q04725 743 aa21.28■■□□□ 1
COPE-201ENST00000262812 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
COPE-201ENST00000262812 SCFD2Q8WU76 684 aa21.28■■□□□ 1
COPE-201ENST00000262812 COPS5Q92905 334 aa21.28■■□□□ 1
COPE-201ENST00000262812 ZFP91Q96JP5 570 aaPredicted RBP21.28■■□□□ 1
COPE-201ENST00000262812 GLT1D1Q96MS3 346 aa21.28■■□□□ 1
COPE-201ENST00000262812 RBM28Q9NW13 759 aaKnown RBP21.28■■□□□ 1
COPE-201ENST00000262812 Q9Y3F1 56 aa21.28■■□□□ 1
COPE-201ENST00000262812 MCM3APO60318 1980 aa21.27■■□□□ 1
COPE-201ENST00000262812 EPB41L2O43491 1005 aaKnown RBP21.27■■□□□ 1
COPE-201ENST00000262812 PQBP1O60828 265 aaKnown RBP21.27■■□□□ 1
COPE-201ENST00000262812 GHRHRQ02643 423 aa21.27■■□□□ 1
COPE-201ENST00000262812 PPP2R5BQ15173 497 aa21.27■■□□□ 1
COPE-201ENST00000262812 HABP4Q5JVS0 413 aaKnown RBP21.27■■□□□ 1
COPE-201ENST00000262812 CXCL17Q6UXB2 119 aa21.27■■□□□ 1
COPE-201ENST00000262812 OR6J1Q8NGC5 347 aa21.27■■□□□ 1
COPE-201ENST00000262812 PRDM5Q9NQX1 630 aaPredicted RBP21.27■■□□□ 1
COPE-201ENST00000262812 RBM27Q9P2N5 1060 aaKnown RBP21.27■■□□□ 1
COPE-201ENST00000262812 V9GY48 417 aaPredicted RBP21.27■■□□□ 1
COPE-201ENST00000262812 ZEB2O60315 1214 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 EIF3JO75822 258 aaKnown RBP21.26■□□□□ 0.99
COPE-201ENST00000262812 ARIH2O95376 493 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 CDC27P30260 824 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 ADD1P35611 737 aaKnown RBP21.26■□□□□ 0.99
COPE-201ENST00000262812 NKX3-2P78367 333 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 TTLL4Q14679 1199 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 SNX17Q15036 470 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 USP17L6PQ6QN14 398 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 RUFY3Q7L099 469 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 HEATR3Q7Z4Q2 680 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 PDCD2LQ9BRP1 358 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 FAM217BQ9NTX9 383 aaPredicted RBP21.26■□□□□ 0.99
COPE-201ENST00000262812 PRKAG2Q9UGJ0 569 aa21.26■□□□□ 0.99
COPE-201ENST00000262812 LCTP09848 1927 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 MAGEA10P43363 369 aaPredicted RBP21.25■□□□□ 0.99
COPE-201ENST00000262812 METAP2P50579 478 aaKnown RBP eCLIP21.25■□□□□ 0.994e-7■■■□□ 15.1
COPE-201ENST00000262812 MDM2Q00987 491 aaPredicted RBP21.25■□□□□ 0.99
COPE-201ENST00000262812 PGM5Q15124 567 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 C1orf53Q5VUE5 145 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 IL31RAQ8NI17 732 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 SMARCC2Q8TAQ2 1214 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 GPKOWQ92917 476 aaPredicted RBP eCLIP21.25■□□□□ 0.99
COPE-201ENST00000262812 CUL5Q93034 780 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 PSTPIP2Q9H939 334 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 ZSWIM6Q9HCJ5 1215 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 CYP46A1Q9Y6A2 500 aa21.25■□□□□ 0.99
COPE-201ENST00000262812 MYL3P08590 195 aa21.24■□□□□ 0.99
COPE-201ENST00000262812 SH3RF1Q7Z6J0 888 aa21.24■□□□□ 0.99
COPE-201ENST00000262812 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
COPE-201ENST00000262812 LARP6Q9BRS8 491 aaKnown RBP21.24■□□□□ 0.99
COPE-201ENST00000262812 UPF3BQ9BZI7 483 aaKnown RBP21.24■□□□□ 0.99
COPE-201ENST00000262812 BAZ2BQ9UIF8 2168 aaKnown RBP21.24■□□□□ 0.99
COPE-201ENST00000262812 ELP1O95163 1332 aa21.24■□□□□ 0.99
COPE-201ENST00000262812 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
COPE-201ENST00000262812 FUT2Q10981 343 aa21.23■□□□□ 0.99
COPE-201ENST00000262812 CCDC62Q6P9F0 684 aa21.23■□□□□ 0.99
COPE-201ENST00000262812 GDF15Q99988 308 aa21.23■□□□□ 0.99
COPE-201ENST00000262812 ALPK3Q96L96 1907 aa21.23■□□□□ 0.99
COPE-201ENST00000262812 CNTNAP5Q8WYK1 1306 aa21.23■□□□□ 0.99
COPE-201ENST00000262812 CEP290O15078 2479 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 A0A0U1RQG5 324 aaPredicted RBP21.22■□□□□ 0.99
COPE-201ENST00000262812 TRIM43BA6NCK2 446 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 MEIS2O14770 477 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 CCND2P30279 289 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 CPT1AP50416 773 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 PSMC6P62333 389 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 TRIM43Q96BQ3 446 aaPredicted RBP21.22■□□□□ 0.99
COPE-201ENST00000262812 LBHD1Q9BQE6 289 aaPredicted RBP21.22■□□□□ 0.99
COPE-201ENST00000262812 MRVI1Q9Y6F6 885 aa21.22■□□□□ 0.99
COPE-201ENST00000262812 CCDC196A0A1B0GTZ2 297 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms