RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 RMDN3Q96TC7 470 aa27.84■■■□□ 2.05
SCN1B-201ENST00000262631 SOWAHBA6NEL2 793 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 SLC15A5A6NIM6 579 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 EDIL3O43854 480 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 FCGRTP55899 365 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 NONOQ15233 471 aaKnown RBP eCLIP27.83■■■□□ 2.05
SCN1B-201ENST00000262631 FOXD4L6Q3SYB3 417 aaPredicted RBP27.83■■■□□ 2.05
SCN1B-201ENST00000262631 FOXD4L3Q6VB84 417 aaPredicted RBP27.83■■■□□ 2.05
SCN1B-201ENST00000262631 CD99L2Q8TCZ2 262 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 ZSCAN16Q9H4T2 348 aaPredicted RBP27.83■■■□□ 2.05
SCN1B-201ENST00000262631 PLXNB2O15031 1838 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 RPTORQ8N122 1335 aa27.83■■■□□ 2.05
SCN1B-201ENST00000262631 LCTP09848 1927 aa27.83■■■□□ 2.04
SCN1B-201ENST00000262631 WNT7AO00755 349 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 EIF2AK2P19525 551 aaKnown RBP27.82■■■□□ 2.04
SCN1B-201ENST00000262631 BRAPQ7Z569 592 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 IL31RAQ8NI17 732 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 CRYGNQ8WXF5 182 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 CHAMP1Q96JM3 812 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 PXMP2Q9NR77 195 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 GJD2Q9UKL4 321 aa27.82■■■□□ 2.04
SCN1B-201ENST00000262631 SREBF1P36956 1147 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 MCTP2Q6DN12 878 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 FRMPD4Q14CM0 1322 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 TOB1P50616 345 aaPredicted RBP27.81■■■□□ 2.04
SCN1B-201ENST00000262631 ZNF792Q3KQV3 632 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 ARHGEF16Q5VV41 709 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 USP6NLQ92738 828 aa27.81■■■□□ 2.04
SCN1B-201ENST00000262631 FKTNO75072 461 aa27.8■■■□□ 2.04
SCN1B-201ENST00000262631 ARHGAP4P98171 946 aa27.8■■■□□ 2.04
SCN1B-201ENST00000262631 NBR1Q14596 966 aa27.8■■■□□ 2.04
SCN1B-201ENST00000262631 MYSM1Q5VVJ2 828 aa27.8■■■□□ 2.04
SCN1B-201ENST00000262631 NSUN6Q8TEA1 469 aaKnown RBP27.8■■■□□ 2.04
SCN1B-201ENST00000262631 KIF22Q14807 665 aa27.79■■■□□ 2.04
SCN1B-201ENST00000262631 DPP9Q86TI2 863 aa27.79■■■□□ 2.04
SCN1B-201ENST00000262631 DNERQ8NFT8 737 aa27.79■■■□□ 2.04
SCN1B-201ENST00000262631 NPLOC4Q8TAT6 608 aa27.79■■■□□ 2.04
SCN1B-201ENST00000262631 ZFP91Q96JP5 570 aaPredicted RBP27.79■■■□□ 2.04
SCN1B-201ENST00000262631 PDCD2LQ9BRP1 358 aa27.79■■■□□ 2.04
SCN1B-201ENST00000262631 ATP2B1P20020 1258 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 ALDH5A1P51649 535 aaPredicted RBP27.78■■■□□ 2.04
SCN1B-201ENST00000262631 MAP2K5Q13163 448 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 PGM5Q15124 567 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 NUDT12Q9BQG2 462 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 GABRQQ9UN88 632 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 DOCK3Q8IZD9 2030 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 HTTP42858 3142 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 NEK8Q86SG6 692 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 ADD3Q9UEY8 706 aaKnown RBP27.78■■■□□ 2.04
SCN1B-201ENST00000262631 ZNF236Q9UL36 1845 aa27.78■■■□□ 2.04
SCN1B-201ENST00000262631 MGAMO43451 1857 aa27.77■■■□□ 2.04
SCN1B-201ENST00000262631 LETM2Q2VYF4 491 aa27.77■■■□□ 2.04
SCN1B-201ENST00000262631 SOCS4Q8WXH5 440 aa27.77■■■□□ 2.04
SCN1B-201ENST00000262631 FTOQ9C0B1 505 aaKnown RBP eCLIP27.77■■■□□ 2.04
SCN1B-201ENST00000262631 NR3C2P08235 984 aa27.76■■■□□ 2.03
SCN1B-201ENST00000262631 PRKCZQ05513 592 aa27.76■■■□□ 2.03
SCN1B-201ENST00000262631 EHMT1Q9H9B1 1298 aa27.76■■■□□ 2.03
SCN1B-201ENST00000262631 ZNFX1Q9P2E3 1918 aaKnown RBP27.76■■■□□ 2.03
SCN1B-201ENST00000262631 CYP2B6P20813 491 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 MRPS9P82933 396 aaKnown RBP27.75■■■□□ 2.03
SCN1B-201ENST00000262631 RILPL1Q5EBL4 403 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 ERO1AQ96HE7 468 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 MAML3Q96JK9 1138 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 PCDHB6Q9Y5E3 794 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 CENPFP49454 3210 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 TDP2O95551 362 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 CYP3A4P08684 503 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 HOXC6P09630 235 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 MYCLP12524 364 aaPredicted RBP27.75■■■□□ 2.03
SCN1B-201ENST00000262631 EDNRBP24530 442 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 FLT3LGP49771 235 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 PCNX4Q63HM2 1172 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 VSIG10LQ86VR7 867 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 CYP2W1Q8TAV3 490 aa27.75■■■□□ 2.03
SCN1B-201ENST00000262631 NOL7Q9UMY1 257 aaKnown RBP27.75■■■□□ 2.03
SCN1B-201ENST00000262631 FAM86B1E9PN63 330 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 FOXN1O15353 648 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 FAM86B2P0C5J1 330 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 RGS2P41220 211 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 TRAPPC10P48553 1259 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 USP11P51784 963 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 DNM1Q05193 864 aaKnown RBP27.74■■■□□ 2.03
SCN1B-201ENST00000262631 TNPO1Q92973 898 aaKnown RBP27.74■■■□□ 2.03
SCN1B-201ENST00000262631 IWS1Q96ST2 819 aa27.74■■■□□ 2.03
SCN1B-201ENST00000262631 DIS3Q9Y2L1 958 aaKnown RBP27.74■■■□□ 2.03
SCN1B-201ENST00000262631 MYH7BA7E2Y1 1941 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 CCNT1O60563 726 aaKnown RBP27.73■■■□□ 2.03
SCN1B-201ENST00000262631 CCL14Q16627 93 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 TTC38Q5R3I4 469 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 USP28Q96RU2 1077 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 APBA2Q99767 749 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 RTEL1Q9NZ71 1219 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 FLRT1Q9NZU1 646 aa27.73■■■□□ 2.03
SCN1B-201ENST00000262631 ZNF174Q15697 407 aa27.72■■■□□ 2.03
SCN1B-201ENST00000262631 ZNF467Q7Z7K2 595 aaPredicted RBP27.72■■■□□ 2.03
SCN1B-201ENST00000262631 SLC5A4Q9NY91 659 aa27.72■■■□□ 2.03
SCN1B-201ENST00000262631 TFIP11Q9UBB9 837 aaKnown RBP27.72■■■□□ 2.03
SCN1B-201ENST00000262631 HSPA1AP0DMV8 641 aaKnown RBP27.72■■■□□ 2.03
SCN1B-201ENST00000262631 HSPA1BP0DMV9 641 aaKnown RBP27.72■■■□□ 2.03
SCN1B-201ENST00000262631 ITGB5P18084 799 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms