RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 XDHP47989 1333 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 NR2F2P24468 414 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 SESN3P58005 492 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 AKT3Q9Y243 479 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 PASKQ96RG2 1323 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 HECW2Q9P2P5 1572 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 POC1B-GALNT4F8VUJ3 575 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 RNF8O76064 485 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 USPL1Q5W0Q7 1092 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 KCTD16Q68DU8 428 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 ECE1P42892 770 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 FAM160B1Q5W0V3 765 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 HAUS4Q9H6D7 363 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 MAGEF1Q9HAY2 307 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 BZW2Q9Y6E2 419 aaKnown RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 CEP152O94986 1710 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 H7C0C1 242 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 HNRNPDLO14979 420 aaKnown RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 NSFP46459 744 aaKnown RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 ATP5OP48047 213 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 PTK2Q05397 1052 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 BCAP29Q9UHQ4 241 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 A0A087WWV3 80 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 CLRN2A0PK11 232 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 SKA2Q8WVK7 121 aaPredicted RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 MRFAP1L1Q96HT8 127 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 PDE11AQ9HCR9 933 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 ZNF500O60304 480 aaPredicted RBP11.17□□□□□ -0.62
PHF3-201ENST00000262043 CXCR5P32302 372 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 MUM1L1Q5H9M0 696 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 RAPH1Q70E73 1250 aa11.17□□□□□ -0.62
PHF3-201ENST00000262043 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 SLC35F6Q8N357 371 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 TET3O43151 1660 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 LTKP29376 864 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 DPCR1Q3MIW9 517 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 TRIM56Q9BRZ2 755 aaKnown RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 ETF1P62495 437 aaKnown RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 PDZD4Q76G19 769 aaPredicted RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 MIS12Q9H081 205 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 SMYD2Q9NRG4 433 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 MAN1B1Q9UKM7 699 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 ADD2P35612 726 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 PSMC2P35998 433 aaKnown RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 SNX1Q13596 522 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 PRPSAP1Q14558 356 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 APOA5Q6Q788 366 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
PHF3-201ENST00000262043 H2AFZP0C0S5 128 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 STAT2P52630 851 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 MFAP3P55082 362 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 H2AFVQ71UI9 128 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 DCLK2Q8N568 766 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 BCAS4Q8TDM0 211 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 RPS6KC1Q96S38 1066 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
PHF3-201ENST00000262043 AMNQ9BXJ7 453 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 OPHN1O60890 802 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 ZMYND10O75800 440 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 PPP2R5AQ15172 486 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 AK8Q96MA6 479 aa11.16□□□□□ -0.62
PHF3-201ENST00000262043 CLIC2O15247 247 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 SLC16A2P36021 539 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 IRX4P78413 519 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 SLC39A14Q15043 492 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 RFX6Q8HWS3 928 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 FAM71BQ8TC56 605 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 LRRC8CQ8TDW0 803 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 PGBD1Q96JS3 809 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 COPRSQ9NQ92 184 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
PHF3-201ENST00000262043 SEMA3EO15041 775 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 CLTAP09496 248 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 ARHGAP4P98171 946 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 LRRC41Q15345 812 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 MMEL1Q495T6 779 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
PHF3-201ENST00000262043 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.62
PHF3-201ENST00000262043 MAGOHBQ96A72 148 aaKnown RBP11.15□□□□□ -0.62
PHF3-201ENST00000262043 CUEDC2Q9H467 287 aa11.15□□□□□ -0.62
PHF3-201ENST00000262043 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms