RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PCDHA7Q9UN72 937 aa15.34■□□□□ 0.05
CDH1-201ENST00000261769 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.05
CDH1-201ENST00000261769 FERP16591 822 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 STAT3P40763 770 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.05
CDH1-201ENST00000261769 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.05
CDH1-201ENST00000261769 ADAM9Q13443 819 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 CCDC127Q96BQ5 260 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 NSUN4Q96CB9 384 aaKnown RBP15.33■□□□□ 0.05
CDH1-201ENST00000261769 PPP1R9BQ96SB3 815 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 ST7Q9NRC1 585 aa15.33■□□□□ 0.05
CDH1-201ENST00000261769 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 GYS1P13807 737 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 MAGEA1P43355 309 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 NEDD9Q14511 834 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 NLRP7Q8WX94 980 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 ZNF830Q96NB3 372 aaPredicted RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 TRERF1Q96PN7 1200 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 MYL1P05976 194 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 KARSQ15046 597 aaKnown RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 CGNQ9P2M7 1197 aaKnown RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 PARP2Q9UGN5 583 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 USP32Q8NFA0 1604 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 ORC4O43929 436 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 UBE2SQ16763 222 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 SESTD1Q86VW0 696 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 CACTINQ8WUQ7 758 aaKnown RBP15.33■□□□□ 0.04
CDH1-201ENST00000261769 FAM151AQ8WW52 585 aa15.33■□□□□ 0.04
CDH1-201ENST00000261769 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 MMP14P50281 582 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 TTLL4Q14679 1199 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 ELMSAN1Q6PJG2 1045 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 GSDMAQ96QA5 445 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 TBC1D22BQ9NU19 505 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 A0A1W2PRG0 241 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 SHTN1A0MZ66 631 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 HSF2BPO75031 334 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 ANGEL2Q5VTE6 544 aaKnown RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 GTF3C2Q8WUA4 911 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 LPAR1Q92633 364 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 RBM10P98175 930 aaKnown RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 KIAA1841Q6NSI8 718 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 CEP128Q6ZU80 1094 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 METTL23Q86XA0 190 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 SLC39A2Q9NP94 309 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 ERCC3P19447 782 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 ZNF157P51786 506 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 GJA10Q969M2 543 aa15.32■□□□□ 0.04
CDH1-201ENST00000261769 STMN4Q9H169 189 aaPredicted RBP15.32■□□□□ 0.04
CDH1-201ENST00000261769 ASB14A6NK59 587 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 E7EVH7 732 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 PSMD14O00487 310 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 CAPN9O14815 690 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 TUBBP07437 444 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 HDLBPQ00341 1268 aaKnown RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 LRMPQ12912 555 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ANKRD36BP1Q96IX9 119 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ZNF512BQ96KM6 892 aaPredicted RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 CLIC6Q96NY7 704 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 MMP19Q99542 508 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 PHLPP2Q6ZVD8 1323 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 BPIFB4P59827 614 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 MTMR1Q13613 665 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ALCAMQ13740 583 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 PCDHA6Q9UN73 950 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms