RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TMBIM4Q9HC24 238 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 NLRP5P59047 1200 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 NAALADL2Q58DX5 795 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 KLHDC7AQ5VTJ3 777 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 MAATS1Q7Z4T9 603 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 RASSF8Q8NHQ8 419 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 NCK2O43639 380 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 GREM2Q9H772 168 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 MAGEF1Q9HAY2 307 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 PLCB1Q9NQ66 1216 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 ANAPC4Q9UJX5 808 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 PLAAQ9Y263 795 aa12.72□□□□□ -0.37
TROAP-201ENST00000257909 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.72□□□□□ -0.37
TROAP-201ENST00000257909 CCDC189A1A4V9 331 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 DDAH1O94760 285 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 BIRC3Q13489 604 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
TROAP-201ENST00000257909 C4orf32Q8N8J7 132 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 CUEDC2Q9H467 287 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 DDX20Q9UHI6 824 aaKnown RBP12.71□□□□□ -0.37
TROAP-201ENST00000257909 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 TRAPPC3O43617 180 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 CDC37Q16543 378 aaPredicted RBP12.71□□□□□ -0.37
TROAP-201ENST00000257909 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 LACTB2Q53H82 288 aaPredicted RBP12.71□□□□□ -0.37
TROAP-201ENST00000257909 ANKRD20A8PQ5CZ79 823 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 ANKRD40Q6AI12 368 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 DTHD1Q6ZMT9 781 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 RUFY4Q6ZNE9 571 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 CASKIN2Q8WXE0 1202 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 MS4A14Q96JA4 679 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 POLD4Q9HCU8 107 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.37
TROAP-201ENST00000257909 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.38
TROAP-201ENST00000257909 CNTNAP5Q8WYK1 1306 aa12.71□□□□□ -0.38
TROAP-201ENST00000257909 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
TROAP-201ENST00000257909 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
TROAP-201ENST00000257909 CALML3P27482 149 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
TROAP-201ENST00000257909 UBA7P41226 1012 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 CTSWP56202 376 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 TROAPQ12815 778 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 XRCC4Q13426 336 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 OSBPL7Q9BZF2 842 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 LUC7LQ9NQ29 371 aaKnown RBP12.7□□□□□ -0.38
TROAP-201ENST00000257909 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 SCG2P13521 617 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 FGFR2P21802 821 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
TROAP-201ENST00000257909 TNNC1P63316 161 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 RASGRF1Q13972 1273 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 CACNA2D3Q8IZS8 1091 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 SALL4Q9UJQ4 1053 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 TPX2Q9ULW0 747 aaKnown RBP12.7□□□□□ -0.38
TROAP-201ENST00000257909 SIK3Q9Y2K2 1263 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 MYH3P11055 1940 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
TROAP-201ENST00000257909 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
TROAP-201ENST00000257909 MINDY4BA8MYZ0 360 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 DNM1LO00429 736 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 PDHBP11177 359 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 SLC5A1P13866 664 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 SEC16BQ96JE7 1060 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 SCLT1Q96NL6 688 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 KRT12Q99456 494 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 TAF1DQ9H5J8 278 aaPredicted RBP12.69□□□□□ -0.38
TROAP-201ENST00000257909 PAEPP09466 180 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms