RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RGS12O14924 1447 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 ARHGAP42A6NI28 874 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 GBP1P32455 592 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 RBL2Q08999 1139 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 FLAD1Q8NFF5 587 aa20.42■□□□□ 0.86
SMARCC1-201ENST00000254480 NLRP10Q86W26 655 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 ZSWIM5Q9P217 1185 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 MAGI2Q86UL8 1455 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 C7orf31Q8N865 590 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 FAM149B1Q96BN6 582 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 SSH2Q76I76 1423 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 SEMA3EO15041 775 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 MTERF2Q49AM1 385 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 FAM160B1Q5W0V3 765 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 RFX6Q8HWS3 928 aa20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 NXF1Q9UBU9 619 aaKnown RBP20.41■□□□□ 0.86
SMARCC1-201ENST00000254480 KRT26Q7Z3Y9 468 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 PIH1D3Q9NQM4 214 aaKnown RBP20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 GJB4Q9NTQ9 266 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 GSTA1P08263 222 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 GSTA2P09210 222 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 GOLGA5Q8TBA6 731 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 CEP170P1Q96L14 293 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 KMT5AQ9NQR1 393 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 LEMD3Q9Y2U8 911 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 TLR3O15455 904 aaKnown RBP20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 ATF2P15336 505 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 TFAMQ00059 246 aaKnown RBP20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 WHAMMP3Q1A5X7 153 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 SLC35F6Q8N357 371 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 SGK1O00141 431 aa20.4■□□□□ 0.86
SMARCC1-201ENST00000254480 MECOMQ03112 1051 aa20.39■□□□□ 0.86
SMARCC1-201ENST00000254480 MCUQ8NE86 351 aa20.39■□□□□ 0.86
SMARCC1-201ENST00000254480 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.86
SMARCC1-201ENST00000254480 SFI1A8K8P3 1242 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 RNF8O76064 485 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 CIAO1O76071 339 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 DDIT3P35638 169 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 YWHAGP61981 247 aaKnown RBP eCLIP20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 PIGBQ92521 554 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 VCX3BQ9H321 246 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 SERPINB13Q9UIV8 391 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 ADGRL2O95490 1459 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 N4BP1O75113 896 aaKnown RBP20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 CD58P19256 250 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 SLC39A14Q15043 492 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 SUSD4Q5VX71 490 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 GALNT17Q6IS24 598 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 FAM135BQ49AJ0 1406 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 GOLGA8IPA6NC78 632 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 GOLGA8JA6NMD2 632 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 RBM6P78332 1123 aaKnown RBP20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 CPVLQ9H3G5 476 aa20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 FEZ2Q9UHY8 353 aaPredicted RBP20.39■□□□□ 0.85
SMARCC1-201ENST00000254480 SCARA5Q6ZMJ2 495 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 FAM133AQ8N9E0 248 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 PCDHB6Q9Y5E3 794 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 UGGT1Q9NYU2 1555 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 SEC31AO94979 1220 aaKnown RBP20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 PTK2Q05397 1052 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 NBPF3Q9H094 633 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 POLD4Q9HCU8 107 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 IFNAR2P48551 515 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 GFPT2O94808 682 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 SESN3P58005 492 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 SARNPP82979 210 aaKnown RBP20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 KCNG1Q9UIX4 513 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 A6NJR5 290 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 BMP3P12645 472 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 P3H4Q92791 437 aa20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 SAMSN1Q9NSI8 373 aaKnown RBP20.38■□□□□ 0.85
SMARCC1-201ENST00000254480 RNF40O75150 1001 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 SLC7A3Q8WY07 619 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 METTL14Q9HCE5 456 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 STAT2P52630 851 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 FAM186BQ8IYM0 893 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 CTTNQ14247 550 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 HLFQ16534 295 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 TRIML1Q8N9V2 468 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 PPP4R1Q8TF05 950 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 NLRP7Q8WX94 980 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 FAM114A2Q9NRY5 505 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 MAN1B1Q9UKM7 699 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 FAM196BA6NMK8 535 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 BAG2O95816 211 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 PHBP35232 272 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 RASGRF1Q13972 1273 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 FOXP1Q9H334 677 aaPredicted RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 CLNS1AP54105 237 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 RSRC2Q7L4I2 434 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms