RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PTPN18Q99952 460 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 ANO3Q9BYT9 981 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 TFIP11Q9UBB9 837 aaKnown RBP14.73□□□□□ -0.05
LSM8-201ENST00000249299 PFASO15067 1338 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 LOC102724159A0A0B4J2E5 919 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 A0A0G2JMZ2 1700 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 FIBPO43427 364 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 CNMDO75829 334 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 PRPHP41219 470 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 FRMPD4Q14CM0 1322 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 PWP2Q15269 919 aaKnown RBP14.72□□□□□ -0.05
LSM8-201ENST00000249299 UBE2SQ16763 222 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 INF2Q27J81 1249 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
LSM8-201ENST00000249299 PARP14Q460N5 1801 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
LSM8-201ENST00000249299 RNF207Q6ZRF8 634 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 FAM43AQ8N2R8 423 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 MBOAT7Q96N66 472 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 LMBRD1Q9NUN5 540 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 CLIC4Q9Y696 253 aa14.72□□□□□ -0.05
LSM8-201ENST00000249299 A0A1W2PQ27 194 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 A0A1W2PQ64 194 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 A0A1W2PQD8 194 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 NFIBO00712 420 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ADAMTS3O15072 1205 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 PRPF40AO75400 957 aaKnown RBP14.71□□□□□ -0.05
LSM8-201ENST00000249299 MBD3O95983 291 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 RPS6P62753 249 aaKnown RBP14.71□□□□□ -0.05
LSM8-201ENST00000249299 ERVK-9P63128 1117 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ERVK-24P63145 666 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ARHGAP4P98171 946 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ATP2C1P98194 919 aaPredicted RBP14.71□□□□□ -0.05
LSM8-201ENST00000249299 FAM110CQ1W6H9 321 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ADALQ6DHV7 355 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 ABRAQ8N0Z2 381 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 DNERQ8NFT8 737 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 MOV10L1Q9BXT6 1211 aaKnown RBP14.71□□□□□ -0.05
LSM8-201ENST00000249299 TMEM260Q9NX78 707 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 RIPK3Q9Y572 518 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 PCDHB6Q9Y5E3 794 aa14.71□□□□□ -0.05
LSM8-201ENST00000249299 RPTORQ8N122 1335 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 TBX3O15119 743 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 STRNO43815 780 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 PTPREP23469 700 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 PSEN1P49768 467 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 PLS1Q14651 629 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 MUM1L1Q5H9M0 696 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 NIPA1Q7RTP0 329 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
LSM8-201ENST00000249299 CYP39A1Q9NYL5 469 aa14.7□□□□□ -0.06
LSM8-201ENST00000249299 SRPRBQ9Y5M8 271 aaKnown RBP14.7□□□□□ -0.06
LSM8-201ENST00000249299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 B4DLN1 442 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 NEMFO60524 1076 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 CUTAO60888 179 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 STAM2O75886 525 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 CYP2C8P10632 490 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 MKRN3Q13064 507 aaKnown RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 LETM2Q2VYF4 491 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 NOM1Q5C9Z4 860 aaKnown RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 KRI1Q8N9T8 703 aaKnown RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 NSUN6Q8TEA1 469 aaKnown RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 ZFP91Q96JP5 570 aaPredicted RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 IWS1Q96ST2 819 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 PAGR1Q9BTK6 254 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 A1CFQ9NQ94 594 aaKnown RBP14.69□□□□□ -0.06
LSM8-201ENST00000249299 ADGRA2Q96PE1 1338 aa14.69□□□□□ -0.06
LSM8-201ENST00000249299 IGF2BP3O00425 579 aaKnown RBP eCLIP14.68□□□□□ -0.06
LSM8-201ENST00000249299 CCNT1O60563 726 aaKnown RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 BCRP11274 1271 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 ERCC3P19447 782 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 CMA1P23946 247 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 MAPK4P31152 587 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 HOXA13P31271 388 aaPredicted RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 MCM7P33993 719 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 MAP2K2P36507 400 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 ME1P48163 572 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 CEBPZQ03701 1054 aaKnown RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 PTGDRQ13258 359 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 PDAP1Q13442 181 aaKnown RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 BAATQ14032 418 aaPredicted RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 Q4G0T1 1027 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 PCNX4Q63HM2 1172 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 TBC1D5Q92609 795 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 CFHR5Q9BXR6 569 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 FTOQ9C0B1 505 aaKnown RBP eCLIP14.68□□□□□ -0.06
LSM8-201ENST00000249299 ZFYVE28Q9HCC9 887 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 HOMER2Q9NSB8 354 aa14.68□□□□□ -0.06
LSM8-201ENST00000249299 BMP2KQ9NSY1 1161 aaPredicted RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 ADD3Q9UEY8 706 aaKnown RBP14.68□□□□□ -0.06
LSM8-201ENST00000249299 MAFGO15525 162 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms