RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
VPREB3-201ENST00000248948 SCN10AQ9Y5Y9 1956 aa14.76□□□□□ -0.05
VPREB3-201ENST00000248948 MYH7BA7E2Y1 1941 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 A0A1W2PQ45 241 aaPredicted RBP14.75□□□□□ -0.05
VPREB3-201ENST00000248948 A0A1W2PQY0 241 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 MYADML2A6NDP7 307 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 GCOM1H8Y6P7 765 aaPredicted RBP14.75□□□□□ -0.05
VPREB3-201ENST00000248948 hCG_1984214I3L0E3 225 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 NKRFO15226 690 aaKnown RBP eCLIP14.75□□□□□ -0.05
VPREB3-201ENST00000248948 POLR2MP0CAP2 368 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 CPA1P15085 419 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 SMPD1P17405 629 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 ACLYP53396 1101 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 ANAPC15P60006 121 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 ARHGEF16Q5VV41 709 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 PPP1R18Q6NYC8 613 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 Q6ZUG5 572 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 RUFY3Q7L099 469 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 RAB11FIP4Q86YS3 637 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 ZNF713Q8N859 430 aaPredicted RBP14.75□□□□□ -0.05
VPREB3-201ENST00000248948 TBC1D5Q92609 795 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 BRF1Q92994 677 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 TAAR1Q96RJ0 339 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
VPREB3-201ENST00000248948 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
VPREB3-201ENST00000248948 PIK3CDO00329 1044 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 CTAGE5O15320 804 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 EIF2AK2P19525 551 aaKnown RBP14.74□□□□□ -0.05
VPREB3-201ENST00000248948 METAP2P50579 478 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPREB3-201ENST00000248948 EVCP57679 992 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 STXBP2Q15833 593 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 SLC39A5Q6ZMH5 540 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 WDR11Q9BZH6 1224 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 AP5M1Q9H0R1 490 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 PDGFCQ9NRA1 345 aa14.74□□□□□ -0.05
VPREB3-201ENST00000248948 ELP1O95163 1332 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 HOXA13P31271 388 aaPredicted RBP14.73□□□□□ -0.05
VPREB3-201ENST00000248948 RTP1P59025 263 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 FUT2Q10981 343 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 TTLL4Q14679 1199 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 KCNA10Q16322 511 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 FSCN1Q16658 493 aaKnown RBP14.73□□□□□ -0.05
VPREB3-201ENST00000248948 NOL8Q76FK4 1167 aaKnown RBP14.73□□□□□ -0.05
VPREB3-201ENST00000248948 CMTR1Q8N1G2 835 aaKnown RBP14.73□□□□□ -0.05
VPREB3-201ENST00000248948 PIBF1Q8WXW3 757 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 IL17RAQ96F46 866 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 GLT1D1Q96MS3 346 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 PDCD2LQ9BRP1 358 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
VPREB3-201ENST00000248948 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 DOCK5Q9H7D0 1870 aa14.73□□□□□ -0.05
VPREB3-201ENST00000248948 RANBP2P49792 3224 aaKnown RBP14.72□□□□□ -0.05
VPREB3-201ENST00000248948 MROH7Q68CQ1 1323 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 TANC1Q9C0D5 1861 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 ZEB2O60315 1214 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
VPREB3-201ENST00000248948 CABYRO75952 493 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 ASGR1P07306 291 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 NR3C2P08235 984 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 CPT1AP50416 773 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 ATN1P54259 1190 aaPredicted RBP14.72□□□□□ -0.05
VPREB3-201ENST00000248948 PGM5Q15124 567 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 TRIM60Q495X7 471 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 GNASQ5JWF2 1037 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 CUL5Q93034 780 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 FERMT2Q96AC1 680 aa14.72□□□□□ -0.05
VPREB3-201ENST00000248948 FAM217BQ9NTX9 383 aaPredicted RBP14.72□□□□□ -0.05
VPREB3-201ENST00000248948 STAM2O75886 525 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 CDC27P30260 824 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 CCND2P30279 289 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 SMARCC2Q8TAQ2 1214 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 SEZ6LQ9BYH1 1024 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 NAP1L2Q9ULW6 460 aaPredicted RBP14.71□□□□□ -0.05
VPREB3-201ENST00000248948 ATP11BQ9Y2G3 1177 aa14.71□□□□□ -0.05
VPREB3-201ENST00000248948 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 MEIS2O14770 477 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 DYNC1LI2O43237 492 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 TXNP10599 105 aaKnown RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 IRX5P78411 483 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 BEX3Q00994 111 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 TOB2Q14106 344 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 BRDTQ58F21 947 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 XRRA1Q6P2D8 792 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 CCDC62Q6P9F0 684 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 KCNV1Q6PIU1 500 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 ANKRD33Q7Z3H0 272 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 VSIG10LQ86VR7 867 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 FCHSD1Q86WN1 690 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 CCDC82Q8N4S0 544 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 EMID1Q96A84 441 aaPredicted RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
VPREB3-201ENST00000248948 PRO3102Q9H379 93 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 POLR3EQ9NVU0 708 aa14.7□□□□□ -0.06
VPREB3-201ENST00000248948 TRIOBPQ9H2D6 2365 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms