RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 DNM2P50570 870 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 RBM5P52756 815 aaKnown RBP eCLIP19.41■□□□□ 0.7
LRFN3-201ENST00000246529 TBC1D8BQ0IIM8 1120 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 KIF4BQ2VIQ3 1234 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 MIIPQ5JXC2 388 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 CNNM4Q6P4Q7 775 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 NOC3LQ8WTT2 800 aaKnown RBP19.41■□□□□ 0.7
LRFN3-201ENST00000246529 HAS1Q92839 578 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 DNAJC7Q99615 494 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 DDX25Q9UHL0 483 aaKnown RBP19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 ERCC3P19447 782 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 CUL5Q93034 780 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
LRFN3-201ENST00000246529 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
LRFN3-201ENST00000246529 SNAP25P60880 206 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 LRRC41Q15345 812 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 RAD54LQ92698 747 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 PCMTD1Q96MG8 357 aaPredicted RBP19.4■□□□□ 0.7
LRFN3-201ENST00000246529 EEF2P13639 858 aaKnown RBP19.4■□□□□ 0.7
LRFN3-201ENST00000246529 TRIM21P19474 475 aaKnown RBP19.4■□□□□ 0.7
LRFN3-201ENST00000246529 SEMA3FQ13275 785 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 KRT79Q5XKE5 535 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 TMCO3Q6UWJ1 677 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 AKT1S1Q96B36 256 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 MASTLQ96GX5 879 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 GUCA1BQ9UMX6 200 aa19.4■□□□□ 0.7
LRFN3-201ENST00000246529 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 CTAGE9A4FU28 777 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 PNMA6AP0CW24 399 aaPredicted RBP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 PDE6BP35913 854 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 DMTNQ08495 405 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 SH3BP5LQ7L8J4 393 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 ZSCAN29Q8IWY8 852 aaPredicted RBP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 DDX12PQ92771 950 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 GOLGA1Q92805 767 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 TTYH3Q9C0H2 523 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 ARGLU1Q9NWB6 273 aaPredicted RBP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 ZRANB2O95218 330 aaKnown RBP eCLIP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 HERVK_113P62684 666 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 PPP1R18Q6NYC8 613 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 UNC13DQ70J99 1090 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 PARD6BQ9BYG5 372 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 TMX4Q9H1E5 349 aaPredicted RBP19.39■□□□□ 0.69
LRFN3-201ENST00000246529 FAM198AQ9UFP1 575 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 CDC23Q9UJX2 597 aa19.39■□□□□ 0.69
LRFN3-201ENST00000246529 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 MARCH6O60337 910 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 MRPL12P52815 198 aaKnown RBP19.38■□□□□ 0.69
LRFN3-201ENST00000246529 CHMP4BP1P59074 171 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 PDIA5Q14554 519 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 BMS1Q14692 1282 aaKnown RBP19.38■□□□□ 0.69
LRFN3-201ENST00000246529 QRICH1Q2TAL8 776 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 PPP4R3AQ6IN85 833 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 GPIHBP1Q8IV16 184 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
LRFN3-201ENST00000246529 ZDHHC15Q96MV8 337 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 TAL1P17542 331 aaPredicted RBP19.38■□□□□ 0.69
LRFN3-201ENST00000246529 TMEM119Q4V9L6 283 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 SRGAP1Q7Z6B7 1085 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 MTMR8Q96EF0 704 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 RAB34Q9BZG1 259 aa19.38■□□□□ 0.69
LRFN3-201ENST00000246529 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
LRFN3-201ENST00000246529 NAPGQ99747 312 aaPredicted RBP19.37■□□□□ 0.69
LRFN3-201ENST00000246529 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
LRFN3-201ENST00000246529 GDF11O95390 407 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 APBA3O96018 575 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 SLC1A4P43007 532 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 SEPT2Q15019 361 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 TSR1Q2NL82 804 aaKnown RBP19.36■□□□□ 0.69
LRFN3-201ENST00000246529 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
LRFN3-201ENST00000246529 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 RABGGTAQ92696 567 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 EHD4Q9H223 541 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 PCDHA1Q9Y5I3 950 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 SSBP05455 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
LRFN3-201ENST00000246529 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
LRFN3-201ENST00000246529 NRXN2Q9P2S2 1712 aa19.36■□□□□ 0.69
LRFN3-201ENST00000246529 PVALEFA0A1B0GWK0 134 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 EPHB6O15197 1021 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 C2CD5Q86YS7 1000 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 PCDHA12Q9UN75 941 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 ECE2O60344 883 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 PLA2G4AP47712 749 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 CACNB1Q02641 598 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms