RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TBC1D5Q92609 795 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 BTBD7Q9P203 1132 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 IGF2BP3O00425 579 aaKnown RBP eCLIP19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 AOC2O75106 756 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 ICAM1P05362 532 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 SAFBQ15424 915 aaKnown RBP eCLIP19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 TXNRD2Q9NNW7 524 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 SH3GLB2Q9NR46 395 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 BIN2Q9UBW5 565 aaPredicted RBP19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 OSBPP22059 807 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 KRT2P35908 639 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 ZRSR1Q15695 479 aaKnown RBP19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 SNRNP48Q6IEG0 339 aaKnown RBP19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 USP17L6PQ6QN14 398 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 REPS2Q8NFH8 660 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 CCDC148Q8NFR7 591 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 PDCL3Q9H2J4 239 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 PSTPIP2Q9H939 334 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 CREBZFQ9NS37 354 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 ADAMTS5Q9UNA0 930 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 HPSEQ9Y251 543 aa19.22■□□□□ 0.67
CDKN1A-201ENST00000244741 OPLAHO14841 1288 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 ECM2O94769 699 aaPredicted RBP19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 HOXA13P31271 388 aaPredicted RBP19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 SYKP43405 635 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 NLRP12P59046 1061 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 MUM1L1Q5H9M0 696 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 JAKMIP3Q5VZ66 844 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 LRRC8AQ8IWT6 810 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 BLIDQ8IZY5 108 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 SMCR8Q8TEV9 937 aaPredicted RBP19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 TSC1Q92574 1164 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 CCDC102AQ96A19 550 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 CLIC6Q96NY7 704 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 BPIFA3Q9BQP9 254 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 ZMYND12Q9H0C1 365 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 R3HDMLQ9H3Y0 253 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 ZNF214Q9UL59 606 aaPredicted RBP19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 PCDHA4Q9UN74 947 aa19.21■□□□□ 0.67
CDKN1A-201ENST00000244741 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.661e-5■□□□□ 9
CDKN1A-201ENST00000244741 ADCY7P51828 1080 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 PABPC4Q13310 644 aaKnown RBP eCLIP19.2■□□□□ 0.662e-8■■■■■ 36.1
CDKN1A-201ENST00000244741 JMYQ8N9B5 988 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 CCDC12Q8WUD4 166 aaPredicted RBP19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 TIGD1Q96MW7 591 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 C6orf50Q9HD87 102 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 NFIBO00712 420 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
CDKN1A-201ENST00000244741 CFBP00751 764 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 Q3C1V9 767 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 RESP18Q5W5W9 173 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 LBX2Q6XYB7 198 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 ANKRD23Q86SG2 305 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 CAPNS2Q96L46 248 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 BRMS1Q9HCU9 246 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 PCDHA6Q9UN73 950 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 PCDHA8Q9Y5H6 950 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 FAM237AA0A1B0GTK4 181 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 MANSC4A6NHS7 340 aaPredicted RBP19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 hCG_1984214I3L0E3 225 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 CALML3P27482 149 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 STAT3P40763 770 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 ZNF713Q8N859 430 aaPredicted RBP19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 CUL5Q93034 780 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 TRERF1Q96PN7 1200 aa19.19■□□□□ 0.66
CDKN1A-201ENST00000244741 CNMDO75829 334 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 GNA11P29992 359 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 ISM2Q6H9L7 571 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 ANKRD13CQ8N6S4 541 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 RIC8AQ9NPQ8 531 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 CENPFP49454 3210 aa19.18■□□□□ 0.66
CDKN1A-201ENST00000244741 TOB1P50616 345 aaPredicted RBP19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 NCAPHQ15003 741 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 TEX13BQ9BXU2 312 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 FOXP1Q9H334 677 aaPredicted RBP19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 PNMA3Q9UL41 463 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 MYPNQ86TC9 1320 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 RASSF10A6NK89 507 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 MEIS2O14770 477 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 CUTAO60888 179 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 FCHSD1Q86WN1 690 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 IFNL1Q8IU54 200 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 CLEC4DQ8WXI8 215 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 TNFRSF25Q93038 417 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 HHIPL1Q96JK4 782 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 RNF146Q9NTX7 359 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 TUBE1Q9UJT0 475 aa19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 MRPL11Q9Y3B7 192 aaKnown RBP19.17■□□□□ 0.66
CDKN1A-201ENST00000244741 M0R2N6 131 aa19.16■□□□□ 0.66
CDKN1A-201ENST00000244741 RIOK3O14730 519 aaKnown RBP19.16■□□□□ 0.66
CDKN1A-201ENST00000244741 PPP1R18Q6NYC8 613 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms