RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
PFDN5-201ENST00000243040 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
PFDN5-201ENST00000243040 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
PFDN5-201ENST00000243040 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
PFDN5-201ENST00000243040 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.25□□□□□ -0.45
PFDN5-201ENST00000243040 hCG_1642624A0A1W2PR95 340 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 ADCYAP1R1P41586 468 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 GJA9P57773 515 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 PFKFB3Q16875 520 aaPredicted RBP12.25□□□□□ -0.45
PFDN5-201ENST00000243040 ARHGEF16Q5VV41 709 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 IQSEC1Q6DN90 963 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 HEATR3Q7Z4Q2 680 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 RNF180Q86T96 592 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
PFDN5-201ENST00000243040 PDCD2LQ9BRP1 358 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 HTATIP2Q9BUP3 242 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 RNF26Q9BY78 433 aaPredicted RBP12.25□□□□□ -0.45
PFDN5-201ENST00000243040 C11orf49Q9H6J7 331 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 Q9Y3F1 56 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 MYH7BA7E2Y1 1941 aa12.25□□□□□ -0.45
PFDN5-201ENST00000243040 KBTBD13C9JR72 458 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 STXBP3O00186 592 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 MEIS2O14770 477 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 NR3C2P08235 984 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 EIF2AK2P19525 551 aaKnown RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 HOXA13P31271 388 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 AK2P54819 239 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 TNFAIP2Q03169 654 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 PGM5Q15124 567 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 STXBP2Q15833 593 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 GJC2Q5T442 439 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 KLHDC9Q8NEP7 349 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 CUL5Q93034 780 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 TSEN34Q9BSV6 310 aaKnown RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
PFDN5-201ENST00000243040 V9GY48 417 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-201ENST00000243040 DNAH12Q6ZR08 3092 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 ESYT2A0FGR8 921 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
PFDN5-201ENST00000243040 PGK1P00558 417 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 SCG2P13521 617 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 SMPD1P17405 629 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 CCT2P78371 535 aaKnown RBP12.23□□□□□ -0.45
PFDN5-201ENST00000243040 PKN1Q16512 942 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 DUSP28Q4G0W2 176 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 CCSAPQ6IQ19 270 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-201ENST00000243040 TLK2Q86UE8 772 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 SMARCC2Q8TAQ2 1214 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 SCFD2Q8WU76 684 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 C22orf23Q9BZE7 217 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
PFDN5-201ENST00000243040 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 PHF24Q9UPV7 400 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
PFDN5-201ENST00000243040 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 CTAGE5O15320 804 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 PFKFB2O60825 505 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 EIF3JO75822 258 aaKnown RBP12.22□□□□□ -0.45
PFDN5-201ENST00000243040 STAM2O75886 525 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 CCND2P30279 289 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 NEK4P51957 841 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 NAPAP54920 295 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 SCRN1Q12765 414 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 TTLL4Q14679 1199 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 FCHSD1Q86WN1 690 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
PFDN5-201ENST00000243040 PHKBQ93100 1093 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 KIF2CQ99661 725 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
PFDN5-201ENST00000243040 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 GLT8D2Q9H1C3 349 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
PFDN5-201ENST00000243040 SCN10AQ9Y5Y9 1956 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 LTBP2Q14767 1821 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 STK36Q9NRP7 1315 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 CPLX1O14810 134 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 ARIH2O95376 493 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
PFDN5-201ENST00000243040 CLK2P49760 499 aaKnown RBP12.21□□□□□ -0.45
PFDN5-201ENST00000243040 ADCY7P51828 1080 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 AKAP17AQ02040 695 aaKnown RBP12.21□□□□□ -0.45
PFDN5-201ENST00000243040 STK3Q13188 491 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 SNX17Q15036 470 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 UBE2SQ16763 222 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 C1orf53Q5VUE5 145 aa12.21□□□□□ -0.45
PFDN5-201ENST00000243040 XRRA1Q6P2D8 792 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms