RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ANAPC5Q9UJX4 755 aa7.33□□□□□ -1.24
CSMD2-201ENST00000241312 TMEM191BP0C7N4 346 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 PDE6BP35913 854 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SRRM1Q8IYB3 904 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 UPF3AQ9H1J1 476 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 IFT122Q9HBG6 1241 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF148Q9UQR1 794 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 DAAM1Q9Y4D1 1078 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 EXOC1LA0A1B0GW35 172 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 HEXIM1O94992 359 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 ABCD1P33897 745 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 TIMM10P62072 90 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 ANKRD35Q8N283 1001 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SPDYE16A6NNV3 312 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 NR1D1P20393 614 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 EEF1B2P24534 225 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SYMPKQ92797 1274 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 KRT10P13645 584 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 ADAM9Q13443 819 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 DCLK2Q8N568 766 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 PIP4K2CQ8TBX8 421 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 TCP11Q8WWU5 503 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 USP19O94966 1318 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 EMBQ6PCB8 327 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MYO1FO00160 1098 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 RASGRF2O14827 1237 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 GAP43P17677 238 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MFAP3P55082 362 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 LRRC23Q53EV4 343 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MCF2L2Q86YR7 1114 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 JPH2Q9BR39 696 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 PTPN22Q9Y2R2 807 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 COPB1P53618 953 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 ITKQ08881 620 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SGO2Q562F6 1265 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MFSD14BQ5SR56 506 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MMS22LQ6ZRQ5 1243 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 NEK9Q8TD19 979 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SERTAD1Q9UHV2 236 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MID2Q9UJV3 735 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 CASP14P31944 242 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 TGFBRAP1Q8WUH2 860 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MAML1Q92585 1016 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 C8orf37Q96NL8 207 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 RTEL1Q9NZ71 1219 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 MYO18AQ92614 2054 aaKnown RBP7.32□□□□□ -1.24
CSMD2-201ENST00000241312 IFNAR2P48551 515 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 YY1AP1Q9H869 796 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 FAM26FQ5R3K3 315 aa7.32□□□□□ -1.24
CSMD2-201ENST00000241312 SAT1P21673 171 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 RASSF7Q02833 373 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 NNTQ13423 1086 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 UHMK1Q8TAS1 419 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TEKT2Q9UIF3 430 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ADAMTS12P58397 1594 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 SGK1O00141 431 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PTPREP23469 700 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ARHGEF16Q5VV41 709 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 FANCBQ8NB91 859 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ABTB1Q969K4 478 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 EYA1Q99502 592 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 FMO2Q99518 471 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 SEC31AO94979 1220 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ZC3H18Q86VM9 953 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 GJA10Q969M2 543 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TRAIPQ9BWF2 469 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TMED1Q13445 227 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 IQCB1Q15051 598 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 C6orf118Q5T5N4 469 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 MMS19Q96T76 1030 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 GNGT2O14610 69 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 POLR2MP0CAP2 368 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 RFX1P22670 979 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 MAPKAPK5Q8IW41 473 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 GPT2Q8TD30 523 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 FGD4Q96M96 766 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 USP28Q96RU2 1077 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 A0A0D9SFI3 127 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 H7C0C1 242 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 LMNAP02545 664 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 NR2F2P24468 414 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 MSH2P43246 934 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ATP5OP48047 213 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ATP6V0A1Q93050 837 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 NT5C1BQ96P26 610 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 SLC52A2Q9HAB3 445 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 MTMR6Q9Y217 621 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ATP8A1Q9Y2Q0 1164 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PPME1Q9Y570 386 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CROCCQ5TZA2 2017 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CREB3O43889 395 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TMED2Q15363 201 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TAF11Q15544 211 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 NVLO15381 856 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 POLR2FP61218 127 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms