RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 SLC8A1P32418 973 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 AK8Q96MA6 479 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 BTG4Q9NY30 223 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 TFRCP02786 760 aaKnown RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 PCK1P35558 622 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 STAT1P42224 750 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 HLFQ16534 295 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 HAUS3Q68CZ6 603 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 FAM133AQ8N9E0 248 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 KCND1Q9NSA2 647 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 ASIC3Q9UHC3 531 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CAPN11Q9UMQ6 739 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 LAD1O00515 517 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CORO7P57737 925 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 MSANTD4Q8NCY6 345 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 EYA3Q99504 573 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 PLAAQ9Y263 795 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 LRRC31Q6UY01 552 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 AP1M1Q9BXS5 423 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 AGPAT5Q9NUQ2 364 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 PCDHA12Q9UN75 941 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 ITIH6Q6UXX5 1313 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 HMGB1P1B2RPK0 211 aaPredicted RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 GCNT3O95395 438 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 IRAK1P51617 712 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 ATP2C1P98194 919 aaPredicted RBP12.1□□□□□ -0.47
CCDC170-201ENST00000239374 DDB1Q16531 1140 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 LCMT1Q9UIC8 334 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
CCDC170-201ENST00000239374 A0A1W2PQC6 194 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 LRRC53A6NM62 1247 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 ATP5DP30049 168 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 ERVK-24P63145 666 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 PLCB3Q01970 1234 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 PALMO75781 387 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 GUCY1A3Q02108 690 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 HIBCHQ6NVY1 386 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 MRRFQ96E11 262 aaKnown RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 NMT2O60551 498 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 N4BP2L2Q92802 583 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 SNX12Q9UMY4 172 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 CHUKO15111 745 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 CHMP2AO43633 222 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 ALDH3A1P30838 453 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
CCDC170-201ENST00000239374 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 GCKP35557 465 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 COL4A3BPQ9Y5P4 624 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 IKBKGQ9Y6K9 419 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 ACTN3Q08043 901 aaPredicted RBP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 EXOC3L4Q17RC7 722 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 SMARCAL1Q9NZC9 954 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 DIP2CQ9Y2E4 1556 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 PSMD14O00487 310 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC170-201ENST00000239374 SERPING1P05155 500 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 ZNF18P17022 549 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 C6orf163Q5TEZ5 329 aa12.08□□□□□ -0.48
CCDC170-201ENST00000239374 DDX12PQ92771 950 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms