RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
CTSD-201ENST00000236671 ZNHIT6Q9NWK9 470 aaKnown RBP17.33■□□□□ 0.36
CTSD-201ENST00000236671 STX8Q9UNK0 236 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 MTMR7Q9Y216 660 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 FCER1AP12319 257 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 ASIC1P78348 528 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 CDK17Q00537 523 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 FAM114A1Q8IWE2 563 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 CCDC102AQ96A19 550 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 CCDC47Q96A33 483 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 RPGRIP1Q96KN7 1286 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 ERGIC2Q96RQ1 377 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 SPZ1Q9BXG8 430 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 CPVLQ9H3G5 476 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 VIPAS39Q9H9C1 493 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 MED4Q9NPJ6 270 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 PIM2Q9P1W9 311 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 TARSL2A2RTX5 802 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.365e-7■■■□□ 15.4
CTSD-201ENST00000236671 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 RASA1P20936 1047 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 NAPAP54920 295 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 CKAP4Q07065 602 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 DIXDC1Q155Q3 683 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 GRIK5Q16478 980 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 LETM2Q2VYF4 491 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 RBM17Q96I25 401 aaKnown RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
CTSD-201ENST00000236671 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
CTSD-201ENST00000236671 SNED1Q8TER0 1413 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 ANO9A1A5B4 782 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 MCM3P25205 808 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 PPP1R2P41236 205 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 MTIF2P46199 727 aaKnown RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 GRAPQ13588 217 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 NONOQ15233 471 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTSD-201ENST00000236671 COBLL1Q53SF7 1204 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 AMOTL1Q8IY63 956 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 ZNF444Q8N0Y2 327 aaPredicted RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 KIAA0895Q8NCT3 520 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 MMTAG2Q9BU76 263 aaKnown RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 NOC4LQ9BVI4 516 aaKnown RBP17.31■□□□□ 0.36
CTSD-201ENST00000236671 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
CTSD-201ENST00000236671 IPO7O95373 1038 aaKnown RBP17.3■□□□□ 0.36
CTSD-201ENST00000236671 AARSP49588 968 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTSD-201ENST00000236671 PPP4CP60510 307 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 TGFBRAP1Q8WUH2 860 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 DUSP10Q9Y6W6 482 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
CTSD-201ENST00000236671 ZNF263O14978 683 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 VAV2P52735 878 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 CYP27A1Q02318 531 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
CTSD-201ENST00000236671 PCMTD1Q96MG8 357 aaPredicted RBP17.3■□□□□ 0.36
CTSD-201ENST00000236671 PDE2AO00408 941 aaPredicted RBP17.29■□□□□ 0.36
CTSD-201ENST00000236671 DALRD3Q5D0E6 543 aaKnown RBP17.29■□□□□ 0.36
CTSD-201ENST00000236671 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 HPS3Q969F9 1004 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 CWC15Q9P013 229 aaKnown RBP17.29■□□□□ 0.36
CTSD-201ENST00000236671 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
CTSD-201ENST00000236671 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 MACROD2A1Z1Q3 448 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 ZNF185O15231 689 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 PHACTR2O75167 634 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 BAG3O95817 575 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 TECP42680 631 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 GSTO1P78417 241 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 MAP9Q49MG5 647 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 FKBP15Q5T1M5 1219 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
CTSD-201ENST00000236671 HPCAL4Q9UM19 191 aa17.29■□□□□ 0.36
CTSD-201ENST00000236671 DDX60LQ5H9U9 1706 aaKnown RBP17.28■□□□□ 0.36
CTSD-201ENST00000236671 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
CTSD-201ENST00000236671 IDEP14735 1019 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
CTSD-201ENST00000236671 AMPD3Q01432 767 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 KIF5AQ12840 1032 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 SECISBP2LQ93073 1101 aaKnown RBP17.28■□□□□ 0.36
CTSD-201ENST00000236671 CRAMP1Q96RY5 1269 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
CTSD-201ENST00000236671 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms