RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 E2F4Q16254 413 aa23■■□□□ 1.27
SNX3-201ENST00000230085 HSP90AA4PQ58FG1 418 aa23■■□□□ 1.27
SNX3-201ENST00000230085 TRAPPC11Q7Z392 1133 aa23■■□□□ 1.27
SNX3-201ENST00000230085 TNFRSF25Q93038 417 aa23■■□□□ 1.27
SNX3-201ENST00000230085 COL2A1P02458 1487 aaPredicted RBP23■■□□□ 1.27
SNX3-201ENST00000230085 NF2P35240 595 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 VSNL1P62760 191 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 RUBCNQ92622 972 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 HAUS4Q9H6D7 363 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 PUF60Q9UHX1 559 aaKnown RBP22.99■■□□□ 1.27
SNX3-201ENST00000230085 MYO6Q9UM54 1294 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 RRP15Q9Y3B9 282 aaKnown RBP22.99■■□□□ 1.27
SNX3-201ENST00000230085 TRPM7Q96QT4 1865 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 A0A1W2PQC6 194 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 FAM196BA6NMK8 535 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 PCP11498 1178 aaKnown RBP22.99■■□□□ 1.27
SNX3-201ENST00000230085 KRT2P35908 639 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 ATP2C1P98194 919 aaPredicted RBP22.99■■□□□ 1.27
SNX3-201ENST00000230085 KRT31Q15323 416 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 MOB2Q70IA6 237 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 ANKRD20A12PQ8NF67 263 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 VPS18Q9P253 973 aa22.99■■□□□ 1.27
SNX3-201ENST00000230085 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 MINDY4BA8MYZ0 360 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 HLA-DOAP06340 250 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 MAP9Q49MG5 647 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 HSP90B2PQ58FF3 399 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 C12orf60Q5U649 245 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 OXER1Q8TDS5 423 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 CABP5Q9NP86 173 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 RMND1Q9NWS8 449 aa22.98■■□□□ 1.27
SNX3-201ENST00000230085 ARPP21Q9UBL0 812 aaPredicted RBP22.98■■□□□ 1.27
SNX3-201ENST00000230085 GTPBP6O43824 516 aaPredicted RBP22.97■■□□□ 1.27
SNX3-201ENST00000230085 COPB1P53618 953 aaKnown RBP22.97■■□□□ 1.27
SNX3-201ENST00000230085 CTDSPL2Q05D32 466 aa22.97■■□□□ 1.27
SNX3-201ENST00000230085 MCM6Q14566 821 aa22.97■■□□□ 1.27
SNX3-201ENST00000230085 PKN1Q16512 942 aa22.97■■□□□ 1.27
SNX3-201ENST00000230085 SBK1Q52WX2 424 aa22.97■■□□□ 1.27
SNX3-201ENST00000230085 PAPD7Q5XG87 772 aaKnown RBP22.97■■□□□ 1.27
SNX3-201ENST00000230085 SYMPKQ92797 1274 aaKnown RBP22.97■■□□□ 1.27
SNX3-201ENST00000230085 RBM28Q9NW13 759 aaKnown RBP22.97■■□□□ 1.27
SNX3-201ENST00000230085 USP2O75604 605 aaPredicted RBP22.96■■□□□ 1.27
SNX3-201ENST00000230085 USP14P54578 494 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 NOM1Q5C9Z4 860 aaKnown RBP22.96■■□□□ 1.27
SNX3-201ENST00000230085 EHBP1Q8NDI1 1231 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 DNAJC7Q99615 494 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 DNAJC18Q9H819 358 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 SERPINB13Q9UIV8 391 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 PPP1R12BO60237 982 aaPredicted RBP22.96■■□□□ 1.27
SNX3-201ENST00000230085 MAP3K10Q02779 954 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 TTLL12Q14166 644 aaPredicted RBP22.96■■□□□ 1.27
SNX3-201ENST00000230085 PDXDC2PQ6P474 469 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 AMOTL1Q8IY63 956 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 CCDC148Q8NFR7 591 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 HOOK2Q96ED9 719 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 DYNLL2Q96FJ2 89 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX3-201ENST00000230085 GBA2Q9HCG7 927 aaPredicted RBP22.96■■□□□ 1.27
SNX3-201ENST00000230085 FAN1Q9Y2M0 1017 aa22.96■■□□□ 1.27
SNX3-201ENST00000230085 CALM1P0DP23 149 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 CALM2P0DP24 149 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 CALM3P0DP25 149 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 TCP11X2Q5H9J9 407 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 ZNF658Q5TYW1 1059 aaPredicted RBP22.95■■□□□ 1.26
SNX3-201ENST00000230085 SHISA4Q96DD7 197 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 EPSTI1Q96J88 318 aa22.95■■□□□ 1.26
SNX3-201ENST00000230085 A0A0U1RQJ8 604 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 N4BP3O15049 544 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 TBC1D12O60347 775 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 FGRP09769 529 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 PAK1Q13153 545 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 DCAF15Q66K64 600 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 ACRBPQ8NEB7 543 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 ATRIPQ8WXE1 791 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 EHD4Q9H223 541 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 BRMS1Q9HCU9 246 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 HERC5Q9UII4 1024 aaKnown RBP22.94■■□□□ 1.26
SNX3-201ENST00000230085 EPN1Q9Y6I3 576 aaPredicted RBP22.94■■□□□ 1.26
SNX3-201ENST00000230085 ANO9A1A5B4 782 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 PRPF6O94906 941 aaKnown RBP22.94■■□□□ 1.26
SNX3-201ENST00000230085 NDUFA10O95299 355 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 MYL1P05976 194 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 MAGEA9P43362 315 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 GABPAQ06546 454 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 PPARAQ07869 468 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 ARL6IP4Q66PJ3 421 aaKnown RBP22.94■■□□□ 1.26
SNX3-201ENST00000230085 C2orf69Q8N8R5 385 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 SLC44A5Q8NCS7 719 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 KLRG1Q96E93 195 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 TRIM34Q9BYJ4 488 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 ZSWIM4Q9H7M6 989 aa22.94■■□□□ 1.26
SNX3-201ENST00000230085 GYS2P54840 703 aa22.93■■□□□ 1.26
SNX3-201ENST00000230085 AKAP17AQ02040 695 aaKnown RBP22.93■■□□□ 1.26
SNX3-201ENST00000230085 ITIH3Q06033 890 aa22.93■■□□□ 1.26
SNX3-201ENST00000230085 CKAP4Q07065 602 aaKnown RBP22.93■■□□□ 1.26
SNX3-201ENST00000230085 NPY5RQ15761 445 aa22.93■■□□□ 1.26
SNX3-201ENST00000230085 MEA1Q16626 185 aa22.93■■□□□ 1.26
SNX3-201ENST00000230085 GOLGA6L1Q8N7Z2 621 aa22.93■■□□□ 1.26
SNX3-201ENST00000230085 IPO4Q8TEX9 1081 aaKnown RBP22.93■■□□□ 1.26
SNX3-201ENST00000230085 INCENPQ9NQS7 918 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms