RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 EPB41L4AQ9HCS5 686 aaPredicted RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 LGALS16A8MUM7 142 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 GOLGA8KD6RF30 607 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 KLK7P49862 253 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 SNAP25P60880 206 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 NR1I3Q14994 352 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 ZKSCAN8Q15776 578 aaPredicted RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 EXOC3L4Q17RC7 722 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 PHLDB2Q86SQ0 1253 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 SGMS1Q86VZ5 419 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 STAG1Q8WVM7 1258 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 PRPHP41219 470 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 EPHB4P54760 987 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 VSIG1Q86XK7 387 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 SRBD1Q8N5C6 995 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 PPP1R12CQ9BZL4 782 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 SYNCQ9H7C4 482 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 EHD2Q9NZN4 543 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 FAM184BQ9ULE4 1060 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 THRAP3Q9Y2W1 955 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 CEP170BQ9Y4F5 1589 aaPredicted RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 LRRC53A6NM62 1247 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 IL6STP40189 918 aaPredicted RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 TRAPPC10P48553 1259 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 MXRA7P84157 204 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 LRRC1Q9BTT6 524 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 NOVA2Q9UNW9 492 aaKnown RBP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 FAM169AQ9Y6X4 670 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 SORBS3O60504 671 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 DENND2CQ68D51 928 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 KIAA0825Q8IV33 1275 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
NFKB1-201ENST00000226574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.1■□□□□ 0.01
NFKB1-201ENST00000226574 MAP2P11137 1827 aaKnown RBP15.09■□□□□ 0.01
NFKB1-201ENST00000226574 A0A0U1RQJ8 604 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 A0A1B0GTH6 734 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 ARHGEF35A5YM69 484 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
NFKB1-201ENST00000226574 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
NFKB1-201ENST00000226574 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 NKIRAS1Q9NYS0 192 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 H2AFXP16104 143 aaPredicted RBP15.09■□□□□ 0.01
NFKB1-201ENST00000226574 DHX9Q08211 1270 aaKnown RBP15.09■□□□□ 0.01
NFKB1-201ENST00000226574 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 GFPT2O94808 682 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 IFNB1P01574 187 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 MESDQ14696 234 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 PTPAQ15257 358 aa15.09■□□□□ 0.01
NFKB1-201ENST00000226574 PALMO75781 387 aa15.08■□□□□ 0.01
NFKB1-201ENST00000226574 ZNF365Q70YC5 407 aa15.08■□□□□ 0.01
NFKB1-201ENST00000226574 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0.01
NFKB1-201ENST00000226574 PPP1R14CQ8TAE6 165 aa15.08■□□□□ 0.01
NFKB1-201ENST00000226574 STIM2Q9P246 746 aa15.08■□□□□ 0.01
NFKB1-201ENST00000226574 A0A087WUV0 522 aaPredicted RBP15.08■□□□□ 0
NFKB1-201ENST00000226574 ZRSR2Q15696 482 aaKnown RBP15.08■□□□□ 0
NFKB1-201ENST00000226574 GKAP1Q5VSY0 366 aaPredicted RBP15.08■□□□□ 0
NFKB1-201ENST00000226574 MICAL1Q8TDZ2 1067 aa15.08■□□□□ 0
NFKB1-201ENST00000226574 TSKSQ9UJT2 592 aa15.08■□□□□ 0
NFKB1-201ENST00000226574 BCS1LQ9Y276 419 aa15.08■□□□□ 0
NFKB1-201ENST00000226574 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
NFKB1-201ENST00000226574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.08■□□□□ 0
NFKB1-201ENST00000226574 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 NR1D1P20393 614 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 USP14P54578 494 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 PPM1KQ8N3J5 372 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 DDX12PQ92771 950 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 FUT8Q9BYC5 575 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 IQCGQ9H095 443 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 GOLPH3Q9H4A6 298 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 ZNF446Q9NWS9 450 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 PRPF6O94906 941 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 STK4Q13043 487 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 FAM196BA6NMK8 535 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 KRT14P02533 472 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 MYCLP12524 364 aaPredicted RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 TOB1P50616 345 aaPredicted RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 THOC1Q96FV9 657 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 DCP1AQ9NPI6 582 aaPredicted RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 PALLDQ8WX93 1383 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 H3BQF6 201 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 PEX19P40855 299 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 GUCY1A3Q02108 690 aa15.07■□□□□ 0
NFKB1-201ENST00000226574 PAF1Q8N7H5 531 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms