RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 SAPCD2Q86UD0 394 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 JAMLQ86YT9 394 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 PHACTR4Q8IZ21 702 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 KLHL23Q8NBE8 558 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 SLC17A8Q8NDX2 589 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 MFSD3Q96ES6 412 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 POLR3GLQ9BT43 218 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 FAM126AQ9BYI3 521 aaPredicted RBP8.93□□□□□ -0.98
CCL1-201ENST00000225842 RAD18Q9NS91 495 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 TJP2Q9UDY2 1190 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 THSD7BQ9C0I4 1608 aa8.93□□□□□ -0.98
CCL1-201ENST00000225842 CARMIL3Q8ND23 1372 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 TM4SF5O14894 197 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 TP53P04637 393 aaPredicted RBP8.92□□□□□ -0.98
CCL1-201ENST00000225842 PDGFRBP09619 1106 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
CCL1-201ENST00000225842 SETDB1Q15047 1291 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 LONRF2Q1L5Z9 754 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 TM4SF20Q53R12 229 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
CCL1-201ENST00000225842 PPFIBP1Q86W92 1011 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 NINJ1Q92982 152 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 SLC6A18Q96N87 628 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 KIF2CQ99661 725 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 BRIP1Q9BX63 1249 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 NARFQ9UHQ1 456 aa8.92□□□□□ -0.98
CCL1-201ENST00000225842 GDF2Q9UK05 429 aaPredicted RBP8.92□□□□□ -0.98
CCL1-201ENST00000225842 FLT4P35916 1363 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 AGRPO00253 132 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 CELF2O95319 508 aaKnown RBP8.91□□□□□ -0.98
CCL1-201ENST00000225842 YARSP54577 528 aaKnown RBP8.91□□□□□ -0.98
CCL1-201ENST00000225842 RING1Q06587 406 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 NOGQ13253 232 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCL1-201ENST00000225842 ZBTB37Q5TC79 503 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 CTU1Q7Z7A3 348 aaKnown RBP8.91□□□□□ -0.98
CCL1-201ENST00000225842 TMEM192Q8IY95 271 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 GPC2Q8N158 579 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 HHIPL1Q96JK4 782 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 TMEM87BQ96K49 555 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 EXOC2Q96KP1 924 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 CDC6Q99741 560 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
CCL1-201ENST00000225842 ZNF277Q9NRM2 450 aaPredicted RBP8.91□□□□□ -0.98
CCL1-201ENST00000225842 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 CHPF2Q9P2E5 772 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 ITGB4P16144 1822 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 RGPD2P0DJD1 1756 aa8.91□□□□□ -0.98
CCL1-201ENST00000225842 A0A1W2PQU0 124 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 ID3Q02535 119 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 FOXD4L6Q3SYB3 417 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 AKAP4Q5JQC9 854 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 FAM209AQ5JX71 171 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 HP1BP3Q5SSJ5 553 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 YOD1Q5VVQ6 348 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 FOXD4L3Q6VB84 417 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 FERMT3Q86UX7 667 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 THNSL2Q86YJ6 484 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 MCATQ8IVS2 390 aaKnown RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 DMRTC2Q8IXT2 367 aaPredicted RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 PRPF38AQ8NAV1 312 aaKnown RBP8.9□□□□□ -0.98
CCL1-201ENST00000225842 CHAC2Q8WUX2 184 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 PPP1R14AQ96A00 147 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 SGSM3Q96HU1 749 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 FBRSQ9HAH7 460 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 PPP1R9AQ9ULJ8 1098 aa8.9□□□□□ -0.98
CCL1-201ENST00000225842 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 FZD9O00144 591 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 NPHP1O15259 732 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 PMS1P54277 932 aaKnown RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 ERVK-24P63145 666 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 BBS9Q3SYG4 887 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 CCDC93Q567U6 631 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 ZC3H12BQ5HYM0 836 aaKnown RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 UBR7Q8N806 425 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 UBASH3BQ8TF42 649 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 DHRS1Q96LJ7 313 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 IER2Q9BTL4 223 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 ARHGEF4Q9NR80 690 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 HOMER2Q9NSB8 354 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 TYW1Q9NV66 732 aaKnown RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 SAGE1Q9NXZ1 904 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 LRP2BPQ9P2M1 347 aa8.89□□□□□ -0.99
CCL1-201ENST00000225842 SUCOQ9UBS9 1254 aaKnown RBP8.89□□□□□ -0.99
CCL1-201ENST00000225842 CASP8AP2Q9UKL3 1982 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 A0A087X0B3 334 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 RGS13O14921 159 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 TMPRSS2O15393 492 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 UBOX5O94941 541 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 EPHX1P07099 455 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 CD68P34810 354 aaPredicted RBP8.88□□□□□ -0.99
CCL1-201ENST00000225842 EPS15P42566 896 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 STYK1Q6J9G0 422 aa8.88□□□□□ -0.99
CCL1-201ENST00000225842 USP50Q70EL3 339 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms