RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 STK4Q13043 487 aa23.48■■□□□ 1.35
CCDC130-201ENST00000221554 PICALMQ13492 652 aa23.48■■□□□ 1.35
CCDC130-201ENST00000221554 SLC35F6Q8N357 371 aa23.48■■□□□ 1.35
CCDC130-201ENST00000221554 LARP4BQ92615 738 aaKnown RBP23.48■■□□□ 1.35
CCDC130-201ENST00000221554 CUL5Q93034 780 aa23.48■■□□□ 1.35
CCDC130-201ENST00000221554 CNOT6LQ96LI5 555 aaKnown RBP23.48■■□□□ 1.35
CCDC130-201ENST00000221554 MRIQ9BWK5 157 aa23.48■■□□□ 1.35
CCDC130-201ENST00000221554 FRMPD2Q68DX3 1309 aaPredicted RBP23.48■■□□□ 1.35
CCDC130-201ENST00000221554 RNF225M0QZC1 329 aaPredicted RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 IPO7O95373 1038 aaKnown RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 GRB10Q13322 594 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 MCTP2Q6DN12 878 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 GUF1Q8N442 669 aaKnown RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 LRRC15Q8TF66 581 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 SLF1Q9BQI6 1058 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 TRIM21P19474 475 aaKnown RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 LRRC63Q05C16 580 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 CC2D1AQ6P1N0 951 aaPredicted RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 NLGN1Q8N2Q7 840 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 HNRNPLLQ8WVV9 542 aaKnown RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 AKT1S1Q96B36 256 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 NOC4LQ9BVI4 516 aaKnown RBP23.47■■□□□ 1.35
CCDC130-201ENST00000221554 PARD6BQ9BYG5 372 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 JMJD4Q9H9V9 463 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 TMEM260Q9NX78 707 aa23.47■■□□□ 1.35
CCDC130-201ENST00000221554 MYH8P13535 1937 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 B4DLN1 442 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 CLK2P49760 499 aaKnown RBP23.46■■□□□ 1.35
CCDC130-201ENST00000221554 ADGRF4Q8IZF3 695 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 TEKT1Q969V4 418 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 COA7Q96BR5 231 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 TTYH3Q9C0H2 523 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 BLOC1S4Q9NUP1 217 aa23.46■■□□□ 1.35
CCDC130-201ENST00000221554 SRCAPQ6ZRS2 3230 aa23.45■■□□□ 1.35
CCDC130-201ENST00000221554 ZBTB5O15062 677 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 KRT86O43790 486 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 CCDC84Q86UT8 332 aaPredicted RBP23.45■■□□□ 1.34
CCDC130-201ENST00000221554 LRRC47Q8N1G4 583 aaKnown RBP23.45■■□□□ 1.34
CCDC130-201ENST00000221554 RAD54LQ92698 747 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 CHP1Q99653 195 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 GPCPD1Q9NPB8 672 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 G3V3G9 751 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 PSMD14O00487 310 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 RIMBP2O15034 1052 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 TERF2Q15554 542 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 DCAF8Q5TAQ9 597 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 ARHGAP27Q6ZUM4 889 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 PNMA5Q96PV4 448 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 NT5C3AQ9H0P0 336 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 DHX36Q9H2U1 1008 aaKnown RBP23.45■■□□□ 1.34
CCDC130-201ENST00000221554 KDM3AQ9Y4C1 1321 aa23.45■■□□□ 1.34
CCDC130-201ENST00000221554 CTAGE15A4D2H0 777 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 EIF3CLB5ME19 914 aaKnown RBP23.44■■□□□ 1.34
CCDC130-201ENST00000221554 ERLIN1O75477 346 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 CTAGE8P0CG41 777 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 SHMT1P34896 483 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 PDE6BP35913 854 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
CCDC130-201ENST00000221554 TMEM119Q4V9L6 283 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 CTAGE6Q86UF2 777 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 CTAGE4Q8IX94 777 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 MSANTD4Q8NCY6 345 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 EIF3CQ99613 913 aaKnown RBP23.44■■□□□ 1.34
CCDC130-201ENST00000221554 TSG101Q99816 390 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 BMP2KQ9NSY1 1161 aaPredicted RBP23.44■■□□□ 1.34
CCDC130-201ENST00000221554 PRDM4Q9UKN5 801 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 MYO6Q9UM54 1294 aa23.44■■□□□ 1.34
CCDC130-201ENST00000221554 KIAA0895Q8NCT3 520 aa23.43■■□□□ 1.34
CCDC130-201ENST00000221554 SNX29Q8TEQ0 813 aa23.43■■□□□ 1.34
CCDC130-201ENST00000221554 TSGA10Q9BZW7 698 aa23.43■■□□□ 1.34
CCDC130-201ENST00000221554 GBP3Q9H0R5 595 aa23.43■■□□□ 1.34
CCDC130-201ENST00000221554 DDX4Q9NQI0 724 aaKnown RBP23.43■■□□□ 1.34
CCDC130-201ENST00000221554 RAB21Q9UL25 225 aa23.43■■□□□ 1.34
CCDC130-201ENST00000221554 MYMKA6NI61 221 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 FCER1AP12319 257 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MCM6Q14566 821 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 CDC42EP5Q6NZY7 148 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 WDR59Q6PJI9 974 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 CERS5Q8N5B7 392 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 PCMTD1Q96MG8 357 aaPredicted RBP23.42■■□□□ 1.34
CCDC130-201ENST00000221554 EDEM3Q9BZQ6 932 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 DDX25Q9UHL0 483 aaKnown RBP23.42■■□□□ 1.34
CCDC130-201ENST00000221554 SLC37A4O43826 429 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MARCH6O60337 910 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 TDP2O95551 362 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 HNRNPH3P31942 346 aaKnown RBP23.42■■□□□ 1.34
CCDC130-201ENST00000221554 TNNI2P48788 182 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 HDLBPQ00341 1268 aaKnown RBP23.42■■□□□ 1.34
CCDC130-201ENST00000221554 SLC15A2Q16348 729 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MAN2A1Q16706 1144 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 VWA3BQ502W6 1294 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MIIPQ5JXC2 388 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 HYIQ5T013 277 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 PODNQ7Z5L7 613 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 KIAA1328Q86T90 577 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MSL3Q8N5Y2 521 aaKnown RBP23.42■■□□□ 1.34
CCDC130-201ENST00000221554 DCAF4Q8WV16 495 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 MKL1Q969V6 931 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 RPGRIP1Q96KN7 1286 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms