RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS18-201ENST00000220509 PPP1R12BO60237 982 aaPredicted RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 TBC1D25Q3MII6 688 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 VSTM4Q8IW00 320 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 ENAHQ8N8S7 591 aaPredicted RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 PNKPQ96T60 521 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 RABL2AQ9UBK7 228 aaPredicted RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 ODF2LQ9ULJ1 636 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 ITM2BQ9Y287 266 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 LEMD3Q9Y2U8 911 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 SEMA3EO15041 775 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 DDAH1O94760 285 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 FDPSP14324 419 aaKnown RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 CASP1P29466 404 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 USH1GQ495M9 461 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 CCDC93Q567U6 631 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 MRC1P22897 1456 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
VPS18-201ENST00000220509 KRT9P35527 623 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 TECP42680 631 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 GRAPQ13588 217 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 FBXW10Q5XX13 1052 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
VPS18-201ENST00000220509 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 SV2BQ7L1I2 683 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
VPS18-201ENST00000220509 BCAS4Q8TDM0 211 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 CABP7Q86V35 215 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 SNX29Q8TEQ0 813 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 NELFBQ8WX92 580 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
VPS18-201ENST00000220509 TBC1D7Q9P0N9 293 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 TNIP1Q15025 636 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 KCNB2Q92953 911 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 EPB41L4AQ9HCS5 686 aaPredicted RBP11.66□□□□□ -0.54
VPS18-201ENST00000220509 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
VPS18-201ENST00000220509 UBE2Q2LH0YL09 131 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 ADCY7P51828 1080 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 TAF4BQ92750 862 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 TEKT1Q969V4 418 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 H0YIN7 160 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 TEX33O43247 280 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 SRGAP2O75044 1071 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 CCDC42Q96M95 316 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 UNC45AQ9H3U1 944 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 CAPN7Q9Y6W3 813 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 MACROD2A1Z1Q3 448 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 TRAF5O00463 557 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 ATP8B1O43520 1251 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 INPP5BP32019 993 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 MAP3K9P80192 1104 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 CALCRLQ16602 461 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 HOOK3Q86VS8 718 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 EFCAB13Q8IY85 973 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
VPS18-201ENST00000220509 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
VPS18-201ENST00000220509 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 BICDL2A1A5D9 508 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 PYGBP11216 843 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 CASP14P31944 242 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 RBL2Q08999 1139 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
VPS18-201ENST00000220509 KCTD16Q68DU8 428 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 IGDCC4Q8TDY8 1250 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 PHLPP1O60346 1717 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 STX10O60499 249 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
VPS18-201ENST00000220509 GYS1P13807 737 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 GPSM2P81274 684 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 ALX1Q15699 326 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 NCAPG2Q86XI2 1143 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 MXD3Q9BW11 206 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms