RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 FEM1BQ9UK73 627 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 KIDINS220Q9ULH0 1771 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 GOLGA6L7A0A1B0GV03 622 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 FCER1AP12319 257 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 LRRC41Q15345 812 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 NEDD4P46934 1319 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 MST1RQ04912 1400 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 INO80Q9ULG1 1556 aaPredicted RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 PSAPP07602 524 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 MYL3P08590 195 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 NT5C2P49902 561 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 YWHAEP62258 255 aaKnown RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 BHMT2Q9H2M3 363 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 RPAP3Q9H6T3 665 aaPredicted RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 LAD1O00515 517 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 ZBTB24O43167 697 aaPredicted RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 RPN1P04843 607 aaKnown RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
PKP2-201ENST00000070846 MTMR1Q13613 665 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 TRIM14Q14142 442 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 CCDC77Q9BR77 488 aa12.55□□□□□ -0.4
PKP2-201ENST00000070846 A0A087WWV3 80 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CELF2O95319 508 aaKnown RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 LARGE1O95461 756 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 C12orf60Q5U649 245 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 FAM169AQ9Y6X4 670 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 RGS12O14924 1447 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 MED14O60244 1454 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 A0A1W2PRG0 241 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 GNA14O95837 355 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 PDIA6Q15084 440 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 AK8Q96MA6 479 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 ABCB4P21439 1286 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CATSPER4Q7RTX7 472 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 MICAL1Q8TDZ2 1067 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 E7EVH7 732 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 K7ERI5 159 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 NR2F2P24468 414 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 COG2Q14746 738 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 PSMB7Q99436 277 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 METTL14Q9HCE5 456 aaKnown RBP12.54□□□□□ -0.4
PKP2-201ENST00000070846 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
PKP2-201ENST00000070846 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
PKP2-201ENST00000070846 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.53□□□□□ -0.4
PKP2-201ENST00000070846 V9GYY5 206 aaPredicted RBP12.53□□□□□ -0.4
PKP2-201ENST00000070846 TLDC2A0PJX2 215 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 COBLO75128 1261 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 ARPP19P56211 112 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 MCM6Q14566 821 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 GBP6Q6ZN66 633 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
PKP2-201ENST00000070846 PIGOQ8TEQ8 1089 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 LSM14BQ9BX40 385 aaKnown RBP12.53□□□□□ -0.4
PKP2-201ENST00000070846 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 CLIC2O15247 247 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
PKP2-201ENST00000070846 SCYL2Q6P3W7 929 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 IFT81Q8WYA0 676 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 DDX12PQ92771 950 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
PKP2-201ENST00000070846 CHGBP05060 677 aa12.52□□□□□ -0.4
PKP2-201ENST00000070846 MORC3Q14149 939 aa12.52□□□□□ -0.4
PKP2-201ENST00000070846 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms