RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 NMT2O60551 498 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 EDNRBP24530 442 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
NME1-201ENST00000013034 BFSP2Q13515 415 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 NBPF20Q3BBV1 942 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 ARNTL2Q8WYA1 636 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
NME1-201ENST00000013034 A6NJR5 290 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 ORC4O43929 436 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 KCNJ6P48051 423 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 PDE4DQ08499 809 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 DNERQ8NFT8 737 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 HLA-CQ95604 372 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.31e-9■■□□□ 12.6
NME1-201ENST00000013034 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 MTMR7Q9Y216 660 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 REV3LO60673 3130 aa13.15□□□□□ -0.3
NME1-201ENST00000013034 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 B4DLN1 442 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 FOXP2O15409 715 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 TLL1O43897 1013 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
NME1-201ENST00000013034 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 CALML3P27482 149 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 SLC16A2P36021 539 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
NME1-201ENST00000013034 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 GRB10Q13322 594 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 TMEM31Q5JXX7 168 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 LRFN3Q9BTN0 628 aa13.14□□□□□ -0.31
NME1-201ENST00000013034 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
NME1-201ENST00000013034 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
NME1-201ENST00000013034 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
NME1-201ENST00000013034 RBL2Q08999 1139 aa13.13□□□□□ -0.31
NME1-201ENST00000013034 KRT40Q6A162 431 aa13.13□□□□□ -0.31
NME1-201ENST00000013034 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
NME1-201ENST00000013034 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
NME1-201ENST00000013034 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
NME1-201ENST00000013034 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
NME1-201ENST00000013034 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 FGRP09769 529 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
NME1-201ENST00000013034 PDHBP11177 359 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
NME1-201ENST00000013034 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
NME1-201ENST00000013034 PTGISQ16647 500 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 SESTD1Q86VW0 696 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
NME1-201ENST00000013034 EPHX3Q9H6B9 360 aa13.12□□□□□ -0.31
NME1-201ENST00000013034 LPXNO60711 386 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 SELPP16109 830 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 MX1P20591 662 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 GDPD5Q8WTR4 605 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 COPS5Q92905 334 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 MAF1Q9H063 256 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 TOMM22Q9NS69 142 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
NME1-201ENST00000013034 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
NME1-201ENST00000013034 GPR37L1O60883 481 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 EFCAB14O75071 495 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 ARIH2O95376 493 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 CXCL10P02778 98 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 MMP3P08254 477 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 NUCB1Q02818 461 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 ALX1Q15699 326 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 PPP1R13LQ8WUF5 828 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
NME1-201ENST00000013034 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
NME1-201ENST00000013034 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 GJB5O95377 273 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 GH1P01241 217 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 DEFB103AP81534 67 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 C8orf34Q49A92 452 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms