RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
CD4-201ENST00000011653 FMR1NBQ8N0W7 255 aaPredicted RBP11.92□□□□□ -0.5
CD4-201ENST00000011653 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
CD4-201ENST00000011653 GJA5P36382 358 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 GSDMDP57764 484 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
CD4-201ENST00000011653 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
CD4-201ENST00000011653 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 NFIBO00712 420 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 ZBED4O75132 1171 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 DMTNQ08495 405 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 PTGDRQ13258 359 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
CD4-201ENST00000011653 PTPN14Q15678 1187 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 UTP14CQ5TAP6 766 aaKnown RBP11.91□□□□□ -0.5
CD4-201ENST00000011653 CST9Q5W186 159 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
CD4-201ENST00000011653 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 RIPK3Q9Y572 518 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 A0A087WWV3 80 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 C19orf81C9J6K1 198 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 CYP2C8P10632 490 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 SLC30A10Q6XR72 485 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 CGNQ9P2M7 1197 aaKnown RBP11.91□□□□□ -0.5
CD4-201ENST00000011653 GREB1LQ9C091 1923 aaPredicted RBP11.91□□□□□ -0.5
CD4-201ENST00000011653 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 TDP2O95551 362 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 YEATS4O95619 227 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 COG2Q14746 738 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 PLIN2Q99541 437 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
CD4-201ENST00000011653 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
CD4-201ENST00000011653 ATAD5Q96QE3 1844 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 ZSCAN20P17040 1043 aaPredicted RBP11.9□□□□□ -0.5
CD4-201ENST00000011653 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
CD4-201ENST00000011653 CCZ1BP86790 482 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
CD4-201ENST00000011653 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 BTNL9Q6UXG8 535 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 VWA5AO00534 786 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 ZNF76P36508 570 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 NDUFA8P51970 172 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 TPM4P67936 248 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 PPATQ06203 517 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 NOL9Q5SY16 702 aaKnown RBP11.9□□□□□ -0.5
CD4-201ENST00000011653 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
CD4-201ENST00000011653 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 USP49Q70CQ1 688 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 KRT25Q7Z3Z0 450 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 SMCR8Q8TEV9 937 aaPredicted RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 CCL15-CCL14A0A0B4J2E2 113 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 CCL15Q16663 113 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 NCAPG2Q86XI2 1143 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 GTPBP4Q9BZE4 634 aaKnown RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 RANBP17Q9H2T7 1088 aaKnown RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 SCN4AP35499 1836 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 MEIS2O14770 477 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 TXKP42681 527 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
CD4-201ENST00000011653 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
CD4-201ENST00000011653 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
CD4-201ENST00000011653 GCOM1H8Y6P7 765 aaPredicted RBP11.88□□□□□ -0.51
CD4-201ENST00000011653 OPLAHO14841 1288 aa11.88□□□□□ -0.51
CD4-201ENST00000011653 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
CD4-201ENST00000011653 DHX8Q14562 1220 aaKnown RBP11.88□□□□□ -0.51
CD4-201ENST00000011653 PTPAQ15257 358 aa11.88□□□□□ -0.51
CD4-201ENST00000011653 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
CD4-201ENST00000011653 CCDC150Q8NCX0 1101 aa11.88□□□□□ -0.51
CD4-201ENST00000011653 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
CD4-201ENST00000011653 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CD4-201ENST00000011653 SLC38A10Q9HBR0 1119 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms