RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Tbc1d9bQ5SVR0 1263 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Hspa4Q61316 841 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Foxd1Q61345 456 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Nap1l4Q78ZA7 375 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 WhrnQ80VW5 918 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ms4a5Q810P8 197 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cyp4f39Q8BGU0 532 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Morc2bQ8C5W4 1022 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Depdc1aQ8CIG0 804 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mettl5Q8K1A0 209 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ces1Q8VCC2 565 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Slc5a5Q99PN0 618 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Glrx3Q9CQM9 337 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Zranb2Q9R020 330 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Frmpd3A0A140LIW3 1774 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ccdc6D3YZP9 469 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rfpl4bJ3QPR6 266 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 PurbO35295 324 aaKnown RBP11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Abcd1P48410 736 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mmp14P53690 582 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Hmgb1P63158 215 aaKnown RBP11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 PtgdrP70263 357 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Adgrg6Q6F3F9 1165 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Jade2Q6ZQF7 829 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Cdc23Q8BGZ4 597 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 PaoxQ8C0L6 504 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Hgh1Q8C3I8 393 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Psmd2Q8VDM4 908 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Oxnad1Q8VE38 311 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gmcl1Q920G9 524 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ddah1Q9CWS0 285 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Fsip1Q9D3V5 435 aa11.33□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Prl2c2P04095 224 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nkx2-5P42582 318 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nedd4P46935 887 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Zfp781Q0P5U5 243 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gxylt1Q3UHH8 404 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Vmn1r209Q5NC97 312 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Sema4bQ62179 823 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pabpc4Q6PHQ9 660 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tubb2aQ7TMM9 445 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Olfr832Q7TRG9 312 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 BC048507Q80ZS7 89 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Dclk3Q8BWQ5 790 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Cdk17Q8K0D0 523 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Kbtbd4Q8R179 534 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Bhmt2Q91WS4 363 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 F11Q91Y47 624 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tubb2bQ9CWF2 445 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Saal1Q9D2C2 474 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 FignQ9ERZ6 759 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ercc4Q9QZD4 917 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Sorbs3Q9R1Z8 733 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gm28042B7ZCM9 1014 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Dnaaf5B9EJR8 853 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Hnrnph3D3Z3N4 346 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 NpcdF8VQB8 469 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Slc27a3O88561 667 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mpp3O88910 568 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Actn3O88990 900 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 RaraP11416 462 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Large2Q5XPT3 690 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mcm7Q61881 719 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gpr101Q80T62 511 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pnpla2Q8BJ56 486 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Dennd2aQ8C4S8 1000 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Kiaa1024Q8K3V7 917 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Apbb1ipQ8R5A3 670 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Havcr2Q8VIM0 281 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Anapc4Q91W96 807 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rrp1bQ91YK2 724 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Grin3bQ91ZU9 1003 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tomm22Q9CPQ3 142 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 AacsQ9D2R0 672 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tfr2Q9JKX3 798 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ifi202Q9R002 445 aa11.32□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gcom1E9PZ54 550 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Abcb4P21440 1276 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nf2P46662 596 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 MyzapQ3UIJ9 466 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Eme2Q56A04 373 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tshz1Q5DTH5 1084 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Cct6bQ61390 531 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ulbp1Q8HWA3 334 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Borcs6Q9D6W8 360 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Eef1gQ9D8N0 437 aaKnown RBP11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pdcd6ipQ9WU78 869 aaKnown RBP11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Flt1P35969 1333 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 SynrgQ5SV85 1306 aa11.31□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pcdha4O88689 947 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Orc4O88708 433 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Il13ra2O88786 383 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 CnpP16330 420 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 OatP29758 439 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Lig1P37913 916 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 PodnQ7TQ62 611 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tmco3Q8BH01 678 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Spata32Q8C5V0 334 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Sash3Q8K352 380 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 NapgQ9CWZ7 312 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms