RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Prss51A0A286YDY8 319 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Gcom1E9PZ54 550 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Usp17ldG5E8G2 545 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Usp17lcG5E8I7 545 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Copb2O55029 905 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Rad23aP54726 363 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 PtgdrP70263 357 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Tnfaip8l3Q3TBL6 204 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 MyzapQ3UIJ9 466 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Jakmip3Q5DTN8 844 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Tsg101Q61187 391 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Kif5bQ61768 963 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 WhrnQ80VW5 918 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 MslnlQ8C160 685 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Mettl5Q8K1A0 209 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Tcp11l2Q8K1H7 517 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Ipo7Q9EPL8 1038 aaKnown RBP14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Tfr2Q9JKX3 798 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 ChmQ9QXG2 665 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Zfp646Q6NV66 1788 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 D630036H23RikQ3UQD6 204 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Nlrp2Q4PLS0 1046 aaKnown RBP14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Churc1Q6DG52 112 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Slc17a8Q8BFU8 601 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Maip1Q8BHE8 291 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Igdcc3Q8BQC3 813 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Scfd2Q8BTY8 684 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Lmbrd1Q8K0B2 537 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Cdk17Q8K0D0 523 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Ces1Q8VCC2 565 aa14.86□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Myh14Q6URW6 2000 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 MtrA6H5Y3 1253 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Lekr1B2RVN1 116 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Abcd1P48410 736 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Tubb4bP68372 445 aaKnown RBP14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Zfp781Q0P5U5 243 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Psmd1Q3TXS7 953 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Xxylt1Q3U4G3 392 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Lrrn2Q6PHP6 730 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Epn1Q80VP1 575 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Thap3Q8BJ25 218 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Iqcb1Q8BP00 598 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Spata4Q8K3V1 295 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Bst2Q8R2Q8 172 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Cd248Q91V98 765 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Bhmt2Q91WS4 363 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Trex1Q91XB0 314 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 NapaQ9DB05 295 aa14.85□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Gm7168A0AUV4 508 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Etnk2A7MCT6 385 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Abcb4P21440 1276 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Ccdc102aQ3TMW1 549 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Rsad1Q5SUV1 442 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Peg10Q7TN75 958 aaKnown RBP14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Olfr832Q7TRG9 312 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Rexo1Q7TT28 1213 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Sap130Q8BIH0 1057 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Hirip3Q8BLH7 601 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Ccdc14Q8K2J4 934 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Kremen1Q99N43 473 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Desi2Q9D291 194 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 AacsQ9D2R0 672 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Ccdc105Q9D4K7 499 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 DmtnQ9WV69 405 aa14.84□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Gm4985A2ALC6 410 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Gm1993A6X8I0 212 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 SlxD3Z347 212 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Chrna9G3X8Z7 479 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Barx2O08686 283 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Psmd14O35593 310 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 CatspereP0DP43 985 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 LdhbP16125 334 aaKnown RBP14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Rnf216P58283 853 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Jade2Q6ZQF7 829 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Spag5Q7TME2 1165 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 F11Q91Y47 624 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Fsip1Q9D3V5 435 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Klhl10Q9D5V2 608 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Acot3Q9QYR7 432 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Prkab1Q9R078 270 aa14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Knop1Q9Z2Q2 478 aaKnown RBP14.83□□□□□ -0.03
Pdlim5-208ENSMUST00000196220 Atrnl1Q6A051 1378 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Trappc11B2RXC1 1133 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Ccdc6D3YZP9 469 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Kifap3P70188 793 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Nsun7Q14AW5 724 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Eme2Q56A04 373 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 BC048507Q80ZS7 89 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Frmd3Q8BHD4 595 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Cep95Q8BVV7 827 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Rbm41Q8JZV4 413 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Mical1Q8VDP3 1048 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 PccaQ91ZA3 724 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Arhgef25Q9CWR0 618 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Mis18aQ9CZJ6 204 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Q9DAQ4 598 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Ly6iQ9WU67 134 aa14.83□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Cacna1fQ9JIS7 1985 aa14.82□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Hnrnph3D3Z3N4 346 aaKnown RBP14.82□□□□□ -0.04
Pdlim5-208ENSMUST00000196220 Ugt1a8D3Z748 530 aa14.82□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 103.7 ms