RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Abcb6Q9DC29 842 aa15.15■□□□□ 0.02
Pcdha1-202ENSMUST00000193839 Axin2O88566 840 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 RubcnlQ3TD16 648 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Esyt2Q3TZZ7 845 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sval3Q76I99 144 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 CsadQ9DBE0 493 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Brpf3B2KF05 1204 aaKnown RBP15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 P4hbP09103 509 aaKnown RBP15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 ZfxP17012 799 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zdhhc9P59268 364 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Psmd1Q3TXS7 953 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Cyp7b1Q60991 507 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm2163Q6PCY5 473 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ireb2Q811J3 963 aaKnown RBP15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 IqcdQ9D3V1 458 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rps6ka1P18653 724 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ppp1r7Q3UM45 361 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 SpopQ6ZWS8 374 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 DohhA0A1Y7VJ29 135 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Bfsp1A2AMT1 669 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gna14P30677 355 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mex3cQ05A36 652 aaKnown RBP15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Retreg2Q6NS82 541 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Aox3G3X982 1335 aa15.14■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Cnbd1B1AWM0 430 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ppfia4B8QI36 1187 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lnx1O70263 728 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Nmt2O70311 529 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ctdnep1Q3TP92 244 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Nsrp1Q5NCR9 542 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 SkiQ60698 725 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pspc1Q8R326 523 aaKnown RBP15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Hps3Q91VB4 1002 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Trove2O08848 538 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Atp2a2O55143 1044 aaKnown RBP15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 YwhaeP62259 255 aaKnown RBP15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 SbdsP70122 250 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Znf219Q6IQX8 726 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zfp341Q6PGC9 846 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Clec16aQ80U30 1036 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sulf1Q8K007 870 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Kdm8Q9CXT6 414 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Aldh1b1Q9CZS1 519 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Stmn2P55821 179 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Eef1dP57776 281 aaKnown RBP15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ppp2r5aQ6PD03 486 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Kctd6Q8BNL5 237 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Phf23Q8BSN5 401 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gbp9Q8BTS3 619 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rnf123Q5XPI3 1314 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mdh1P14152 334 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lmnb2P21619 596 aaKnown RBP15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Krt39Q6IFX4 482 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 4931423N10RikQ9D4J9 382 aa15.13■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ccdc51Q3URS9 406 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zcwpw1Q6IR42 630 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 6820408C15RikQ8BJX2 354 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ddx19bQ8BZY3 494 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Fbxo18Q8K2I9 1042 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pcdhb15Q91Y04 786 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Alpk1Q9CXB8 1231 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pdzd4Q9QY39 772 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zfp804bA0A0G2JGH6 1343 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Myom1Q62234 1667 aaKnown RBP15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Dnajb6O54946 365 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ccdc169Q8BXX9 214 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sh2b1Q91ZM2 756 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mtus1Q5HZI1 1210 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Vmn1r209Q5NC97 312 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Igsf3Q6ZQA6 1194 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ms4a5Q810P8 197 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Phldb3E9QAF4 648 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rfc1P35601 1131 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lmbrd1Q8K0B2 537 aa15.12■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm11549A0A286YD83 63 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Acad12D3Z7X0 555 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Cdc25aP48964 514 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Drc1Q3USS3 753 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Luc7l3Q5SUF2 432 aaKnown RBP15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rsad1Q5SUV1 442 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Fgd5Q80UZ0 1219 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mettl24Q8CCB5 363 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Desi2Q9D291 194 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm45194A0A140LJG2 572 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ncf2O70145 525 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sema3fO88632 785 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Calb1P12658 261 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Igfbp6P47880 238 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Irf5P56477 497 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Elf1Q60775 612 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Wdr44Q6NVE8 915 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lman1lQ8VCD3 505 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Tsnaxip1Q99P25 704 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 PdhbQ9D051 359 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Shank2Q80Z38 1476 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 4932429P05RikA2ADI4 785 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 D830030K20RikE9PYQ5 218 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm3043K7N693 218 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm16440K7N6G6 218 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm2244L7N2A3 218 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms