RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Stxbp3Q60770 592 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tmcc1Q69ZZ6 649 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Lmbrd2Q8C561 694 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Inpp5fQ8CDA1 1132 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Spire2Q8K1S6 718 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tomm70Q9CZW5 611 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nol3Q9D1X0 220 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 1700109H08RikQ9D9C0 210 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Bpifb4A2BGH0 617 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Casq2O09161 415 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ctnnd1P30999 938 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Wdr93Q402B2 695 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 NntQ61941 1086 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Bmp2kQ91Z96 1138 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc12a6Q924N4 1150 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cyb5rlB1AS42 316 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gna14P30677 355 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Psmc2P46471 433 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 GnpatP98192 678 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Myl10Q62082 202 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kank4Q6P9J5 1016 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Phactr3Q8BYK5 558 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 SnrkQ8VDU5 748 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sh2d4aQ9D7V1 421 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slx4Q6P1D7 1565 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Il4rP16382 810 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ext2P70428 718 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cdcp1Q5U462 833 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 CtcfQ61164 736 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pank4Q80YV4 820 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ddx42Q810A7 929 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 CcnyQ8BGU5 341 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rccd1Q8BTU7 377 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Klhl12Q8BZM0 568 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ascc2Q91WR3 749 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Styxl1Q9DAR2 321 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tmod4Q9JLH8 345 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Atp8b2P98199 1209 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 VcpQ01853 806 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fbxl5Q8C2S5 690 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zfp449Q8CB76 518 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pcdhb22Q91XZ8 794 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nek8Q91ZR4 698 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Vwa5aQ99KC8 793 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ankrd26Q811D2 1581 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kat6bQ8BRB7 1872 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nek1P51954 1203 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Mapre1Q61166 268 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 HltfQ6PCN7 1003 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Stkld1Q80YS9 662 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rprd2Q6NXI6 1469 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sh3tc1G3X9F6 1346 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 A530032D15RikE9Q422 215 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm29094F6Q785 221 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 XlrP05531 208 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tac1P41539 130 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Hspa4lP48722 838 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rbm17Q8JZX4 405 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Eif3cQ8R1B4 911 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc52a2Q9D8F3 450 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 RabggtaQ9JHK4 567 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ecel1Q9JMI0 775 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gipc2Q9Z2H7 314 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Polr3aB2RXC6 1390 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cyp2j7A0A140T8U1 504 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Map7d3A2AEY4 876 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ppp3ccP48455 513 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Olfm3P63056 478 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccnl1Q52KE7 532 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rab14Q91V41 215 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fads3Q9JJE7 449 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ptk2bQ9QVP9 1009 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Klhl34A2AI76 644 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cfap221A9Q751 836 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm10563F6WIE4 79 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Snx16Q8C080 344 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Abcg3Q99P81 650 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Duxf3A0A0N4SV92 674 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nr1i2O54915 431 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pms2P54279 859 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 CalcaP70160 136 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rnf207Q3V3A7 635 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc12a5Q91V14 1138 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zcchc17Q9ESX4 241 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 TnksQ6PFX9 1320 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zkscan16A2ALW2 728 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Apol11bE9PUZ0 337 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 PpargP37238 505 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Polr2fP61219 127 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Traf5P70191 558 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Znf598Q80YR4 908 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 FtoQ8BGW1 502 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 ZwilchQ8R060 589 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 NclnQ8VCM8 563 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sf3b3Q921M3 1217 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Habp4Q9JKS5 411 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zfp597E9Q6S0 419 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sipa1P46062 1037 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Snrpa1P57784 255 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cct7P80313 544 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms