RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Lypla2Q9WTL7 231 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Gm15448F6PZL4 682 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Has3O08650 554 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Fkbp3Q62446 224 aaKnown RBP28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Itga2bQ9QUM0 1033 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Fgl2P12804 432 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Pls1Q3V0K9 630 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Rgl1Q60695 768 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Adam6bQ6IMH7 756 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Setdb2Q8C267 713 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Prl2c5Q9JLV9 222 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 B3galt4Q9Z0F0 371 aa28.85■■■□□ 2.21
Tpm1-216ENSMUST00000113707 En2P09066 324 aa28.84■■■□□ 2.21
Tpm1-216ENSMUST00000113707 L1camP11627 1260 aa28.84■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Cdc37Q61081 379 aa28.84■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Eif3j2Q66JS6 263 aa28.84■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Garem2Q6PAJ3 880 aa28.84■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Gm4307E9PZY4 289 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Gm4312K9J7E2 289 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 PpardP35396 440 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Trpc6Q61143 930 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Kif5bQ61768 963 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Dhx30Q99PU8 1217 aaKnown RBP28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Git2Q9JLQ2 708 aa28.83■■■□□ 2.21
Tpm1-216ENSMUST00000113707 GpiP06745 558 aaKnown RBP28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ssrp1Q08943 708 aaKnown RBP28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ccz1Q8C1Y8 480 aa28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 PdhbQ9D051 359 aa28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 MymkQ9D1N4 221 aa28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Pabpc6Q9D4E6 643 aaKnown RBP28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Usp14Q9JMA1 493 aaKnown RBP28.83■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Psmc2P46471 433 aa28.82■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Nf2P46662 596 aa28.82■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Acot10Q32MW3 439 aa28.82■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Sdccag8Q80UF4 717 aa28.82■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Acat1Q8QZT1 424 aa28.82■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Anks1aP59672 1150 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Nlrx1Q3TL44 975 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Lrrc36Q3V0M2 755 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Sv2cQ69ZS6 727 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Kdm1aQ6ZQ88 853 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Fbxo10Q7TQF2 950 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Thap3Q8BJ25 218 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 PatjQ63ZW7 1834 aa28.81■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Rfpl4bJ3QPR6 266 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 ThbdP15306 577 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Mettl14Q3UIK4 456 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 GapdhsQ64467 440 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Krt74Q6IFZ9 495 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ercc6lQ8BHK9 1240 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Spata21Q8BHW6 681 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Gprc5cQ8K3J9 440 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Txndc5Q91W90 417 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ifi35Q9D8C4 286 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Abhd2Q9QXM0 425 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Pdcd6ipQ9WU78 869 aaKnown RBP28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 SisF8VQM5 1818 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Stat3P42227 770 aaKnown RBP28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Brd9Q3UQU0 596 aaKnown RBP28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Foxn3Q499D0 457 aa28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 NkapQ9D0F4 415 aaKnown RBP28.8■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ddx23D3Z0M9 819 aaKnown RBP28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Dnajb6O54946 365 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ubxn2bQ0KL01 331 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 HyiQ8R1F5 277 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Kdm4bQ91VY5 1086 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Serpinb3bQ9D1Q5 387 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Tacc2Q9JJG0 1149 aa28.79■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Specc1lQ2KN98 1118 aaKnown RBP28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Tbx2Q60707 711 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Scaf8Q6DID3 1268 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ccdc148Q6P5U8 527 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Scn10aQ6QIY3 1958 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 P2ry10Q8BFU7 328 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Apol10aQ8CCA5 318 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Kremen1Q99N43 473 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Rhobtb3Q9CTN4 611 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Syce1Q9D495 329 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Eif2ak1Q9Z2R9 619 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ripor3A1L3T7 938 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Skint3A7TZF0 458 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ppp1r9aH3BJD6 1292 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Smarca1Q6PGB8 1046 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ddx19bQ8BZY3 494 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Dpp7Q9ET22 506 aa28.78■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Fyb2A2A995 729 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Flot1O08917 428 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 GmnnO88513 206 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 PtpraP18052 829 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Tfcp2l1Q3UNW5 479 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Igdcc3Q8BQC3 813 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Rasal3Q8C2K5 1041 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Tmem134Q8R0J4 195 aa28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Tor1aip1Q921T2 595 aaKnown RBP28.77■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Olfr121Q5CZY0 321 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Nab2Q61127 525 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Yars2Q8BYL4 472 aaKnown RBP28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ago4Q8CJF8 861 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Exoc1Q8R3S6 894 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Mical1Q8VDP3 1048 aa28.76■■■□□ 2.2
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms