RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Tmem132bF7BAB2 1078 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Itgb5O70309 798 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Mt-CybP00158 381 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 CebpaP53566 359 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Xxylt1Q3U4G3 392 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Slc27a1Q60714 646 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Fam126bQ8C729 530 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Fgd4Q91ZT5 766 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Vwa5aQ99KC8 793 aaKnown RBP18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Msgn1Q9JK54 188 aa18.45■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cspp1B2RX88 1205 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Pdzrn4E9PUZ9 1014 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Rabep1O35551 862 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cops5O35864 334 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Tlk2O55047 718 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Kcna2P63141 499 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 StamP70297 548 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Col19a1Q0VF58 1136 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Phtf2Q8CB19 747 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Champ1Q8K327 802 aaKnown RBP18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cep72Q9D3R3 646 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Etnk1Q9D4V0 363 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 PolkQ9QUG2 852 aa18.44■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Elmsan1E9Q2I4 1089 aaKnown RBP18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nolc1E9Q5C9 702 aaKnown RBP18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 SfnO70456 248 aaKnown RBP18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nr5a1P33242 462 aa18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nup88Q8CEC0 753 aaKnown RBP18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 SdsQ8VBT2 327 aa18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Kctd10Q922M3 315 aa18.43■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Rgs9O54828 675 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Phka1P18826 1241 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Gna11P21278 359 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Tdo2P48776 406 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Ptpn18Q61152 453 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Kdm4aQ8BW72 1064 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Tesk2Q8VCT9 570 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Ca9Q8VHB5 437 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nap1l2P51860 460 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Taf1bP97358 586 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Madcam1Q61826 405 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Btbd7Q8CFE5 1130 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Vmn1r191Q8K4D0 298 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Terf2ipQ91VL8 393 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Anapc4Q91W96 807 aa18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nxf1Q99JX7 618 aaKnown RBP18.42■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cpb1B2RS76 415 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 TroapB7ZNG4 668 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cyp3a25O09158 503 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Kmt5bQ3U8K7 883 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Tnni3kQ5GIG6 834 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 PicalmQ7M6Y3 660 aaKnown RBP18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 GneQ91WG8 722 aaKnown RBP18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Plod3Q9R0E1 741 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Ccdc88cQ6VGS5 2009 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cntnap5cQ0V8T7 1305 aa18.41■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Gm8882E9Q7E4 283 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Fam189a2Q4FZH1 290 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Wasf1Q8R5H6 559 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 F11Q91Y47 624 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Bicd2Q921C5 820 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Me2Q99KE1 589 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Limd1Q9QXD8 668 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Eef2kO08796 724 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 GlrbP48168 496 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Cracr2bQ80ZJ8 394 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Nat10Q8K224 1024 aaKnown RBP18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Defb19Q8K3I8 83 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Tmc1Q8R4P5 757 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Rassf3Q99P51 232 aa18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Pkp2Q9CQ73 795 aaKnown RBP18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Ftsj3Q9DBE9 838 aaKnown RBP18.4■□□□□ 0.54
Tpm1-215ENSMUST00000113705 Gm7356A0A087WSA6 508 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Pgap3A2A559 320 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 FosP01101 380 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Grik5Q61626 979 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Liat1Q810M6 228 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Acnat2Q8BGG9 420 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Ddx39aQ8VDW0 427 aaKnown RBP18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Npm3Q9CPP0 175 aaKnown RBP18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Znf704Q9ERQ3 566 aa18.39■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Dnm1P39053 867 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Fam89aQ14BJ1 175 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Esyt3Q5DTI8 891 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Fscn1Q61553 493 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Antxr2Q6DFX2 487 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Bcas3Q8CCN5 928 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Kbtbd4Q8R179 534 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Gpr37l1Q99JG2 481 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Arpp21Q9DCB4 807 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Cdc42ep5Q9Z0X0 150 aa18.38■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Ccdc78D3Z5T1 437 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Gjb4Q02738 266 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Samd11Q1RNF8 542 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Map1sQ8C052 973 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Bud13Q8R149 637 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Ddx41Q91VN6 622 aaKnown RBP18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Hdhd5Q91WM2 419 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Nr2e3Q9QXZ7 395 aa18.37■□□□□ 0.53
Tpm1-215ENSMUST00000113705 Nlrc5C3VPR6 1915 aa18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms