RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Calr3Q9D9Q6 380 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dmrtc1Q9D9R7 182 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 4931423N10RikQ9D4J9 382 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rims2Q9EQZ7 1530 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm5936A2BG95 728 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm5640A3KG49 728 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pik3r1P26450 724 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Krt39Q6IFX4 482 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pstpip2Q99M15 334 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cbx6Q9DBY5 414 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Klhl34A2AI76 644 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm4841E9QAA8 417 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Nxf2Q4ZGD8 691 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Oxsr1Q6P9R2 527 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dpp9Q8BVG4 862 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Polr2bQ8CFI7 1174 aaKnown RBP17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Tsc1Q9EP53 1161 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 MefvQ9JJ26 767 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Krt90E9Q1Z0 538 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cpsf2O35218 782 aaKnown RBP17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 H2afzP0C0S6 128 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 H2afvQ3THW5 128 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 AlcamQ61490 583 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cyp26b1Q811W2 512 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Them5Q9CQJ0 248 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Fem1bQ9Z2G0 627 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Bbs9Q811G0 885 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Scfd1Q8BRF7 639 aaKnown RBP17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Yars2Q8BYL4 472 aaKnown RBP17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ankk1Q8BZ25 745 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 WdpcpQ8C456 722 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Smc6Q924W5 1097 aa17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Add3Q9QYB5 706 aaKnown RBP17.18■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Adcy8P97490 1249 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pank4Q80YV4 820 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 SpertQ32MG2 446 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ankrd6Q69ZU8 712 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Slx1bQ8BX32 270 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rcan1Q9JHG6 198 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Setd1aE9PYH6 1716 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Calb1P12658 261 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Scg2Q03517 617 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Krt34Q9D646 392 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Nup62clA2AG10 272 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Lonrf2B2RT44 518 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pcdh10E9PXQ7 1057 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rasa3Q60790 834 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ccdc68Q8BVC4 333 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gbp5Q8CFB4 590 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 CenpkQ9ESN5 271 aa17.17■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ccdc92bQ5SUE3 299 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Asap3Q5U464 904 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Aggf1Q7TN31 711 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Enox1Q8BHR2 643 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cdk8Q8R3L8 464 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 RereQ80TZ9 1558 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Fam81bA0A140LI28 432 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm10392Q3V3I3 114 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Slc30a9Q5IRJ6 567 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Avpr1aQ62463 423 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Krt12Q64291 487 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pde6cQ91ZQ1 861 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rfwd2Q9R1A8 733 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 DexiQ9WUQ7 95 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 AdgbG3UZ78 1657 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ercc6l2Q9JIM3 1537 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Supt20hQ7TT00 530 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pdzph1Q8BGR1 1238 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Galnt15Q9D2N8 638 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pex3Q9QXY9 372 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Atf2P16951 487 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Zbtb16Q3UQ17 673 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 CrkQ64010 304 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Adgrg6Q6F3F9 1165 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Znf76Q8BMU0 568 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rbm42Q91V81 474 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Fam133bQ9CVI2 245 aaKnown RBP17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Usp28Q5I043 1051 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Serpinb3dQ6UKZ0 387 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Akap7Q7TN79 314 aa17.16■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm11985A0A1B0GS61 206 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pde6aP27664 859 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Zfyve27Q3TXX3 415 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Trip13Q3UA06 432 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dars2Q8BIP0 653 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Clrn2B2RVW2 232 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 XlrP05531 208 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Kiaa1841Q68FF0 718 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ncoa7Q6DFV7 943 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Q6PD19 689 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Anks1bQ8BIZ1 1259 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Mei4Q8BRM6 389 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Pih1h3bQ8C6P5 218 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ddx24Q9ESV0 857 aaKnown RBP17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Vti1aO89116 217 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ighmbp2P40694 993 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Vps37bQ8R0J7 285 aa17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Brpf3B2KF05 1204 aaKnown RBP17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 SfnO70456 248 aaKnown RBP17.15■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Nxf7Q80SZ6 620 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms