RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Map7d1A2AJI0 846 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ddx3xQ62167 662 aaKnown RBP17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Zrsr2Q62377 462 aaKnown RBP17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Asic3Q6X1Y6 530 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Haus4Q8BFT2 363 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 SltmQ8CH25 1031 aaKnown RBP17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tesk2Q8VCT9 570 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Uba5Q8VE47 403 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Dnajc19Q9CQV7 116 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tfap4Q9JIZ5 338 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ercc4Q9QZD4 917 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm5114W4VSN8 858 aa17.87■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Dnai2A2AC93 623 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Akap2O54931 893 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Nck2O55033 380 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Stat4P42228 749 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Senp1P59110 640 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Surf6P70279 355 aaKnown RBP17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Prpf38aQ4FK66 312 aaKnown RBP17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Sco1Q5SUC9 284 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Krit1Q6S5J6 736 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 3830417A13RikQ8BQJ2 303 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Lonrf3Q9D4H7 753 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Sept3Q9Z1S5 350 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm45208A0A140LJ36 292 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Zscan18E9PUD6 809 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Il27raO70394 623 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Rasa3Q60790 834 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Mcm7Q61881 719 aaKnown RBP17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Rasgrp4Q8BTM9 673 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Cdan1Q8CC12 1239 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Slc14a2Q8R4T9 930 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Trap1Q9CQN1 706 aaKnown RBP17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tktl2Q9D4D4 627 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 4931423N10RikQ9D4J9 382 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Slfn1Q9Z0I7 337 aa17.86■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm7347D3YYI9 267 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm42641I6L9G2 585 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Pdrg1P59048 133 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tnfaip8l3Q3TBL6 204 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Klra4Q60651 263 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Arhgef2Q60875 985 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ces3aQ63880 571 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 AtripQ8BMG1 785 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 H6pdQ8CFX1 789 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 LgsnQ8CIX8 563 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 TxlnbQ8VBT1 685 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ces3bQ8VCU1 571 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Nxnl2Q9D531 156 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Mrpl12Q9DB15 201 aaKnown RBP17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Sel1lQ9Z2G6 790 aa17.85■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Man1a2P39098 641 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Wee1P47810 646 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Eva1cP58659 440 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Mdh1bQ5F204 500 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Usp17leQ7M764 540 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Igdcc3Q8BQC3 813 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Rbm19Q8R3C6 952 aaKnown RBP17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Cdk8Q8R3L8 464 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Six6os1Q9CTN5 574 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ddah1Q9CWS0 285 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Znf287Q9EQB9 759 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Cct5P80316 541 aaKnown RBP17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Eya3P97480 510 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tsg101Q61187 391 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Emilin2Q8K482 1074 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Msantd4Q91YU3 345 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Dydc2Q9D3X8 139 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Smco2Q9DA21 347 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Arpp21Q9DCB4 807 aa17.84■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm7356A0A087WSA6 508 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Bicdl1A0JNT9 577 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Rsbn1lD3Z0K6 821 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Prl2c2P04095 224 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Abcb4P21440 1276 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Gfpt1P47856 697 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Eif3j1Q3UGC7 261 aaKnown RBP17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Fhdc1Q3ULZ2 1149 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ppp1r7Q3UM45 361 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Eif3j2Q66JS6 263 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Krt87Q6IMF0 495 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ccdc189Q6NZQ0 333 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ankrd24Q80VM7 985 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Armcx3Q8BHS6 379 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Zc3h6Q8BYK8 1177 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Vcpip1Q8CDG3 1220 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 HmcesQ8R1M0 353 aaKnown RBP17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Osbpl1aQ91XL9 950 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ubxn1Q922Y1 297 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Stat2Q9WVL2 923 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ppp2r3dQ9Z176 491 aa17.83■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Gm13023A2A8N2 498 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ankrd35E9Q9D8 996 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 DnttP09838 530 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Kcnma1Q08460 1209 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ccdc51Q3URS9 406 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Rc3h1Q4VGL6 1130 aaKnown RBP17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Trpc6Q61143 930 aa17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 Ezh2Q61188 746 aaKnown RBP17.82■□□□□ 0.44
Ttc39b-202ENSMUST00000048274 RragaQ80X95 313 aa17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms