RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Pgrmc1O55022 195 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Eif6O55135 245 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Bach1P97302 739 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ckap2Q3V1H1 664 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cdk5rap3Q99LM2 503 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pdcd7Q9WTY1 482 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Prrc2bQ7TPM1 1486 aaKnown RBP17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Il15P48346 162 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Hcls1P49710 486 aaKnown RBP17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Gdap1l1Q8VE33 370 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Tulp1Q9Z273 543 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Erbb4Q61527 1308 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Enc1O35709 589 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Bola3Q8CEI1 110 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ndc80Q9D0F1 642 aaKnown RBP17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ccnyl1D3YUJ3 367 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ftl2P49945 183 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Zscan2Q07230 614 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 HiraQ61666 1015 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pm20d1Q8C165 503 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 IdeQ9JHR7 1019 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Morf4l2Q9R0Q4 288 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 1700011I03RikE9PYL8 271 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Krt87Q6IMF0 495 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Adprhl2Q8CG72 370 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ska2Q9CR46 120 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Skida1Q80YR3 822 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Zfp651E9PZ11 729 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cyp11b2P15539 500 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Art2aP17981 287 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Git1Q68FF6 770 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 4933409G03RikQ8C5U0 320 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Klc4Q9DBS5 619 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Msh6P54276 1358 aaKnown RBP17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Top3aO70157 1003 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ctnnd1P30999 938 aaKnown RBP17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rcor2Q8C796 523 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mknk2Q8CDB0 459 aa17.93■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 TxkP42682 527 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Eya1P97767 591 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Fam81aQ3UXZ6 364 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rpap2Q8VC34 614 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Nr2f2P43135 414 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Epn1Q80VP1 575 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 ArhgdiaQ99PT1 204 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Phkg2Q9DB30 406 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Maml3D4QGC2 1135 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Olfm3P63056 478 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Traf5P70191 558 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 ItkQ03526 625 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Panx2Q6IMP4 677 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Dnaaf1Q9D2H9 634 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ccdc62E9PVD1 701 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pdcd2P46718 343 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 IvlP48997 467 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ahcyl2Q68FL4 613 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 SybuQ8BHS8 665 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cfap36Q8C6E0 343 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Supt3B0QZW4 406 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 EsrraO08580 422 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Krt74Q6IFZ9 495 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Slc12a6Q924N4 1150 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Vmn2r68L7N2B3 851 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 MaeaQ4VC33 396 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 4932411N23RikQ8C0S0 470 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 HnrnprQ8VHM5 632 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Glrx3Q9CQM9 337 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Elmsan1E9Q2I4 1089 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rwdd2aQ9D9S3 292 aa17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Idh1O88844 414 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 DgkiD3YWQ0 1071 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Timm10P62073 90 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Q3KNL4 93 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pdik1lQ8QZR7 341 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Aox2Q5SGK3 1345 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Eif3dO70194 548 aaKnown RBP17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Snx19Q6P4T1 997 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Hip1Q8VD75 1029 aaKnown RBP17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Taf5lQ91WQ5 589 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kmt5aQ2YDW7 349 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Haus4Q8BFT2 363 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cttnbp2nlQ99LJ0 638 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kdm8Q9CXT6 414 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Atp8a1P70704 1164 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mettl17Q3U2U7 461 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cyth3O08967 399 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Trim32Q8CH72 655 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Zswim7Q9CWQ2 152 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rtn3Q9ES97 964 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Map3k10Q66L42 940 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kctd10Q922M3 315 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 4930449I24RikQ9D5E3 319 aa17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ppp1r12aQ9DBR7 1029 aaKnown RBP17.91■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Casq2O09161 415 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Spata18Q0P557 537 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ddx42Q810A7 929 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Dnaaf2Q8BPI1 814 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 AceP09470 1312 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Adcy9P51830 1353 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rgs12Q8CGE9 1381 aa17.9■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms