RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Svs3aF2Z472 265 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm5168Q4KL04 211 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Arid5bQ8BM75 1188 aaKnown RBP10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rnaseh2aQ9CWY8 301 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Myl7Q9QVP4 175 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 GakQ99KY4 1305 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pde6aP27664 859 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 S100bP50114 92 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 CrkQ64010 304 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Q8CEZ4 452 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tspyl4Q8VD63 406 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Arl8aQ8VEH3 186 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cbwd1Q8VEH6 393 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tmod4Q9JLH8 345 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rnf123Q5XPI3 1314 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Acad12D3Z7X0 555 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sclt1G5E861 688 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ddit3P35639 168 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc84Q4VA36 332 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tbc1d9bQ5SVR0 1263 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Prpf3Q922U1 683 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Thap12Q9CUX1 758 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Bbs5Q9CZQ9 341 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Zfp804bA0A0G2JGH6 1343 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sept2P42208 361 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 1700013D24RikQ0P521 120 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Acap3Q6NXL5 833 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Vps52Q8C754 723 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Dusp10Q9ESS0 483 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Chd4Q6PDQ2 1915 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ankrd63A2ARS0 390 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Magea6O89010 325 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 XpcP51612 930 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tcp11Q01755 566 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Magea3Q6T340 320 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tada3Q8R0L9 432 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Trim60Q8VI40 466 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Prc1Q99K43 603 aaKnown RBP10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 1700020D05RikQ99PB1 294 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 DexiQ9WUQ7 95 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Suclg2Q9Z2I8 433 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Wdr19Q3UGF1 1341 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 D430041D05RikF6ZGR6 1678 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm5936A2BG95 728 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm5640A3KG49 728 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tex13cD3YU32 604 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gsta4P24472 222 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc125Q5U465 500 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 LdhdQ7TNG8 484 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc7a6osQ7TPE5 306 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 KhnynQ80U38 671 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tbx22Q8K402 517 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Bag2Q91YN9 210 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pex3Q9QXY9 372 aa10.85□□□□□ -0.67
Ldlr-201ENSMUST00000034713 CoblQ5NBX1 1337 aaKnown RBP10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 AW822073A0A0N4SUK1 652 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm4297D3YWB7 211 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc7a1Q09143 622 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mum1l1Q4VA55 681 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Il17raQ60943 864 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Kcnf1Q7TSH7 493 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pus7lQ8CE46 702 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Hps3Q91VB4 1002 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Zcchc17Q9ESX4 241 aaKnown RBP10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Itgb1bp2Q9R000 350 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cul1Q9WTX6 776 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Serpinb6eI7HJI3 429 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nedd9O35177 833 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ighmbp2P40694 993 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tlr8P58682 1032 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nkx2-3P97334 362 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Lrrc36Q3V0M2 755 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Acbd5Q5XG73 508 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Fbxo11Q7TPD1 930 aaKnown RBP10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Bola2Q8BGS2 86 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Spata21Q8BHW6 681 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Alx1Q8C8B0 326 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cdk8Q8R3L8 464 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Arpp21Q9DCB4 807 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pdzd4Q9QY39 772 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc78D3Z5T1 437 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Arhgap6O54834 987 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 LtkP08923 888 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gna15P30678 374 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Krt87Q6IMF0 495 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Dhx40Q6PE54 779 aaKnown RBP10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ube2oQ6ZPJ3 1288 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 PicalmQ7M6Y3 660 aaKnown RBP10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc39a11Q8BWY7 342 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Psmd2Q8VDM4 908 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ivns1abpQ920Q8 642 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mphosph6Q9D1Q1 161 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cnpy3Q9DAU1 276 aa10.84□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Unc13bQ9Z1N9 1602 aa10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tex13c2A0A0G2JGA3 530 aa10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Snx12O70493 165 aa10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ctnnd1P30999 938 aaKnown RBP10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ephb4P54761 987 aa10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gpcpd1Q8C0L9 675 aa10.83□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tgs1Q923W1 853 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms