RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MIA2Q96PC5 1412 aa26.66■■□□□ 1.86
PHGDH-230ENST00000641927 RRBP1Q9P2E9 1410 aaKnown RBP26.66■■□□□ 1.86
PHGDH-230ENST00000641927 CDC42BPBQ9Y5S2 1711 aa26.64■■□□□ 1.86
PHGDH-230ENST00000641927 PTPN23Q9H3S7 1636 aa26.63■■□□□ 1.85
PHGDH-230ENST00000641927 MAP3K4Q9Y6R4 1608 aa26.61■■□□□ 1.85
PHGDH-230ENST00000641927 TRHP20396 242 aaPredicted RBP26.6■■□□□ 1.85
PHGDH-230ENST00000641927 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
PHGDH-230ENST00000641927 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
PHGDH-230ENST00000641927 EFCAB2Q5VUJ9 269 aa26.6■■□□□ 1.85
PHGDH-230ENST00000641927 ARAP3Q8WWN8 1544 aa26.57■■□□□ 1.84
PHGDH-230ENST00000641927 CAMSAP2Q08AD1 1489 aa26.57■■□□□ 1.84
PHGDH-230ENST00000641927 FANCAO15360 1455 aa26.56■■□□□ 1.84
PHGDH-230ENST00000641927 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
PHGDH-230ENST00000641927 ITGAEP38570 1179 aa26.54■■□□□ 1.84
PHGDH-230ENST00000641927 TSPOAP1O95153 1857 aa26.54■■□□□ 1.84
PHGDH-230ENST00000641927 SAMD9LQ8IVG5 1584 aa26.53■■□□□ 1.84
PHGDH-230ENST00000641927 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
PHGDH-230ENST00000641927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.51■■□□□ 1.83
PHGDH-230ENST00000641927 CFAP74Q9C0B2 1584 aa26.48■■□□□ 1.83
PHGDH-230ENST00000641927 HNRNPMP52272 730 aaKnown RBP eCLIP26.47■■□□□ 1.831e-6■■■■□ 22.8
PHGDH-230ENST00000641927 PLEKHH2Q8IVE3 1493 aa26.47■■□□□ 1.83
PHGDH-230ENST00000641927 AKNAQ7Z591 1439 aa26.46■■□□□ 1.83
PHGDH-230ENST00000641927 TEX14Q8IWB6 1497 aa26.45■■□□□ 1.82
PHGDH-230ENST00000641927 SYCP2Q9BX26 1530 aa26.45■■□□□ 1.82
PHGDH-230ENST00000641927 ADGRL1O94910 1474 aa26.44■■□□□ 1.82
PHGDH-230ENST00000641927 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
PHGDH-230ENST00000641927 NEO1Q92859 1461 aa26.44■■□□□ 1.82
PHGDH-230ENST00000641927 ABCC1P33527 1531 aa26.44■■□□□ 1.82
PHGDH-230ENST00000641927 KIAA1107Q9UPP5 1409 aa26.43■■□□□ 1.82
PHGDH-230ENST00000641927 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
PHGDH-230ENST00000641927 DNMT1P26358 1616 aaKnown RBP26.4■■□□□ 1.82
PHGDH-230ENST00000641927 DAPK1P53355 1430 aa26.4■■□□□ 1.82
PHGDH-230ENST00000641927 ARHGEF12Q9NZN5 1544 aa26.4■■□□□ 1.82
PHGDH-230ENST00000641927 MBD5Q9P267 1494 aa26.39■■□□□ 1.82
PHGDH-230ENST00000641927 ABCC5O15440 1437 aa26.38■■□□□ 1.81
PHGDH-230ENST00000641927 RSPH4AQ5TD94 716 aa26.37■■□□□ 1.81
PHGDH-230ENST00000641927 ARHGEF5Q12774 1597 aa26.37■■□□□ 1.81
PHGDH-230ENST00000641927 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
PHGDH-230ENST00000641927 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
PHGDH-230ENST00000641927 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
PHGDH-230ENST00000641927 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
PHGDH-230ENST00000641927 PTPRKQ15262 1439 aa26.34■■□□□ 1.81
PHGDH-230ENST00000641927 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
PHGDH-230ENST00000641927 AFAP1Q8N556 730 aa26.32■■□□□ 1.8
PHGDH-230ENST00000641927 CROCC2H7BZ55 1655 aa26.31■■□□□ 1.8
PHGDH-230ENST00000641927 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
PHGDH-230ENST00000641927 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
PHGDH-230ENST00000641927 POGZQ7Z3K3 1410 aa26.28■■□□□ 1.8
PHGDH-230ENST00000641927 ZNF518AQ6AHZ1 1483 aa26.28■■□□□ 1.8
PHGDH-230ENST00000641927 RAPGEF3O95398 923 aa26.28■■□□□ 1.8
PHGDH-230ENST00000641927 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
PHGDH-230ENST00000641927 SHANK2Q9UPX8 1470 aa26.27■■□□□ 1.8
PHGDH-230ENST00000641927 SPAG9O60271 1321 aaKnown RBP26.25■■□□□ 1.79
PHGDH-230ENST00000641927 RRP7BPQ9NSQ0 103 aa26.24■■□□□ 1.79
PHGDH-230ENST00000641927 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
PHGDH-230ENST00000641927 ANKRD30AQ9BXX3 1397 aa26.21■■□□□ 1.79
PHGDH-230ENST00000641927 RICTORQ6R327 1708 aa26.2■■□□□ 1.78
PHGDH-230ENST00000641927 MAST1Q9Y2H9 1570 aa26.19■■□□□ 1.78
PHGDH-230ENST00000641927 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
PHGDH-230ENST00000641927 KDM5CP41229 1560 aa26.18■■□□□ 1.78
PHGDH-230ENST00000641927 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
PHGDH-230ENST00000641927 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
PHGDH-230ENST00000641927 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
PHGDH-230ENST00000641927 FRMPD1Q5SYB0 1578 aa26.16■■□□□ 1.78
PHGDH-230ENST00000641927 ZFYVE16Q7Z3T8 1539 aa26.16■■□□□ 1.78
PHGDH-230ENST00000641927 ATP7AQ04656 1500 aa26.16■■□□□ 1.78
PHGDH-230ENST00000641927 RTEL1-TNFRSF6BF6WH68 1400 aa26.15■■□□□ 1.78
PHGDH-230ENST00000641927 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
PHGDH-230ENST00000641927 HECW2Q9P2P5 1572 aa26.14■■□□□ 1.78
PHGDH-230ENST00000641927 INO80Q9ULG1 1556 aaPredicted RBP26.14■■□□□ 1.78
PHGDH-230ENST00000641927 KIF15Q9NS87 1388 aa26.13■■□□□ 1.77
PHGDH-230ENST00000641927 KDM6BO15054 1643 aa26.12■■□□□ 1.77
PHGDH-230ENST00000641927 MLH3Q9UHC1 1453 aa26.12■■□□□ 1.77
PHGDH-230ENST00000641927 NAIPQ13075 1403 aa26.12■■□□□ 1.77
PHGDH-230ENST00000641927 SETD5Q9C0A6 1442 aa26.12■■□□□ 1.77
PHGDH-230ENST00000641927 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
PHGDH-230ENST00000641927 PLXNC1O60486 1568 aa26.1■■□□□ 1.77
PHGDH-230ENST00000641927 ZMYM4Q5VZL5 1548 aa26.09■■□□□ 1.77
PHGDH-230ENST00000641927 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
PHGDH-230ENST00000641927 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
PHGDH-230ENST00000641927 ANKRD50Q9ULJ7 1429 aa26.04■■□□□ 1.76
PHGDH-230ENST00000641927 YEATS2Q9ULM3 1422 aa26.04■■□□□ 1.76
PHGDH-230ENST00000641927 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
PHGDH-230ENST00000641927 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
PHGDH-230ENST00000641927 ABCA6Q8N139 1617 aa26.02■■□□□ 1.76
PHGDH-230ENST00000641927 DIP2CQ9Y2E4 1556 aa25.99■■□□□ 1.75
PHGDH-230ENST00000641927 A2MP01023 1474 aa25.98■■□□□ 1.75
PHGDH-230ENST00000641927 ERBINQ96RT1 1412 aa25.96■■□□□ 1.75
PHGDH-230ENST00000641927 DHX29Q7Z478 1369 aaKnown RBP25.96■■□□□ 1.75
PHGDH-230ENST00000641927 ATP10AO60312 1499 aa25.94■■□□□ 1.74
PHGDH-230ENST00000641927 TRIM52Q96A61 297 aa25.93■■□□□ 1.74
PHGDH-230ENST00000641927 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
PHGDH-230ENST00000641927 HRCP23327 699 aa25.93■■□□□ 1.74
PHGDH-230ENST00000641927 KIF3BO15066 747 aa25.9■■□□□ 1.74
PHGDH-230ENST00000641927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.87■■□□□ 1.735e-16■■□□□ 13.6
PHGDH-230ENST00000641927 EIF2AK4Q9P2K8 1649 aaKnown RBP25.86■■□□□ 1.73
PHGDH-230ENST00000641927 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
PHGDH-230ENST00000641927 REREQ9P2R6 1566 aa25.83■■□□□ 1.72
PHGDH-230ENST00000641927 NUP155O75694 1391 aa25.82■■□□□ 1.72
PHGDH-230ENST00000641927 ARID4BQ4LE39 1312 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms