RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
CASC19-248ENST00000641674 GPR153Q6NV75 609 aa12.74□□□□□ -0.37
CASC19-248ENST00000641674 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
CASC19-248ENST00000641674 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
CASC19-248ENST00000641674 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
CASC19-248ENST00000641674 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
CASC19-248ENST00000641674 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■□□□□ 9.6
CASC19-248ENST00000641674 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
CASC19-248ENST00000641674 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
CASC19-248ENST00000641674 MYT1LQ9UL68 1186 aa12.64□□□□□ -0.39
CASC19-248ENST00000641674 NLRP6P59044 892 aa12.63□□□□□ -0.39
CASC19-248ENST00000641674 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
CASC19-248ENST00000641674 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
CASC19-248ENST00000641674 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
CASC19-248ENST00000641674 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
CASC19-248ENST00000641674 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
CASC19-248ENST00000641674 STK25O00506 426 aa12.53□□□□□ -0.4
CASC19-248ENST00000641674 KIF3CO14782 793 aa12.53□□□□□ -0.4
CASC19-248ENST00000641674 NUDT7P0C024 238 aa12.5□□□□□ -0.41
CASC19-248ENST00000641674 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
CASC19-248ENST00000641674 LSM11P83369 360 aaKnown RBP eCLIP12.48□□□□□ -0.41
CASC19-248ENST00000641674 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
CASC19-248ENST00000641674 PTGER2P43116 358 aa12.45□□□□□ -0.42
CASC19-248ENST00000641674 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
CASC19-248ENST00000641674 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
CASC19-248ENST00000641674 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
CASC19-248ENST00000641674 RGL2O15211 777 aa12.43□□□□□ -0.42
CASC19-248ENST00000641674 PCDHGA4Q9Y5G9 962 aa12.43□□□□□ -0.42
CASC19-248ENST00000641674 PPP1R37O75864 691 aa12.4□□□□□ -0.42
CASC19-248ENST00000641674 PKD2Q13563 968 aa12.39□□□□□ -0.43
CASC19-248ENST00000641674 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
CASC19-248ENST00000641674 SLC34A2O95436 690 aa12.37□□□□□ -0.43
CASC19-248ENST00000641674 PBX2P40425 430 aa12.35□□□□□ -0.43
CASC19-248ENST00000641674 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
CASC19-248ENST00000641674 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
CASC19-248ENST00000641674 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
CASC19-248ENST00000641674 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
CASC19-248ENST00000641674 ABCC9O60706 1549 aa12.25□□□□□ -0.45
CASC19-248ENST00000641674 PSEN2P49810 448 aa12.23□□□□□ -0.45
CASC19-248ENST00000641674 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
CASC19-248ENST00000641674 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
CASC19-248ENST00000641674 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
CASC19-248ENST00000641674 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
CASC19-248ENST00000641674 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
CASC19-248ENST00000641674 FOXK1P85037 733 aa12.18□□□□□ -0.46
CASC19-248ENST00000641674 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
CASC19-248ENST00000641674 DSG2Q14126 1118 aa12.17□□□□□ -0.46
CASC19-248ENST00000641674 HRO43593 1189 aa12.16□□□□□ -0.46
CASC19-248ENST00000641674 GPHNQ9NQX3 736 aaPredicted RBP12.16□□□□□ -0.46
CASC19-248ENST00000641674 TK2O00142 265 aa12.13□□□□□ -0.47
CASC19-248ENST00000641674 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
CASC19-248ENST00000641674 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
CASC19-248ENST00000641674 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
CASC19-248ENST00000641674 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
CASC19-248ENST00000641674 TBC1D12O60347 775 aa12.06□□□□□ -0.48
CASC19-248ENST00000641674 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASC19-248ENST00000641674 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
CASC19-248ENST00000641674 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
CASC19-248ENST00000641674 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
CASC19-248ENST00000641674 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
CASC19-248ENST00000641674 VPS9D1Q9Y2B5 631 aa12.01□□□□□ -0.49
CASC19-248ENST00000641674 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
CASC19-248ENST00000641674 PTPN5P54829 565 aa11.99□□□□□ -0.49
CASC19-248ENST00000641674 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
CASC19-248ENST00000641674 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
CASC19-248ENST00000641674 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
CASC19-248ENST00000641674 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
CASC19-248ENST00000641674 FOSBP53539 338 aa11.92□□□□□ -0.5
CASC19-248ENST00000641674 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
CASC19-248ENST00000641674 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
CASC19-248ENST00000641674 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
CASC19-248ENST00000641674 PTPREP23469 700 aa11.88□□□□□ -0.51
CASC19-248ENST00000641674 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CASC19-248ENST00000641674 SLC4A5Q9BY07 1137 aa11.88□□□□□ -0.51
CASC19-248ENST00000641674 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
CASC19-248ENST00000641674 EVI5O60447 810 aa11.85□□□□□ -0.51
CASC19-248ENST00000641674 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
CASC19-248ENST00000641674 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
CASC19-248ENST00000641674 PDE4AP27815 886 aa11.83□□□□□ -0.52
CASC19-248ENST00000641674 WNT2BQ93097 391 aa11.83□□□□□ -0.52
CASC19-248ENST00000641674 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
CASC19-248ENST00000641674 GOLGA8CPA6NN73 597 aa11.82□□□□□ -0.52
CASC19-248ENST00000641674 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
CASC19-248ENST00000641674 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
CASC19-248ENST00000641674 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
CASC19-248ENST00000641674 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
CASC19-248ENST00000641674 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
CASC19-248ENST00000641674 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
CASC19-248ENST00000641674 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
CASC19-248ENST00000641674 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
CASC19-248ENST00000641674 A0A0G2JS52 829 aa11.75□□□□□ -0.53
CASC19-248ENST00000641674 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
CASC19-248ENST00000641674 PROX2Q3B8N5 592 aa11.74□□□□□ -0.53
CASC19-248ENST00000641674 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
CASC19-248ENST00000641674 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
CASC19-248ENST00000641674 COL9A1P20849 921 aa11.72□□□□□ -0.53
CASC19-248ENST00000641674 MFSD10Q14728 455 aa11.71□□□□□ -0.53
CASC19-248ENST00000641674 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
CASC19-248ENST00000641674 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
CASC19-248ENST00000641674 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms