RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
PHGDH-220ENST00000641570 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
PHGDH-220ENST00000641570 FANCAO15360 1455 aa19.68■□□□□ 0.74
PHGDH-220ENST00000641570 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
PHGDH-220ENST00000641570 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
PHGDH-220ENST00000641570 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
PHGDH-220ENST00000641570 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
PHGDH-220ENST00000641570 CDC42BPAQ5VT25 1732 aa19.63■□□□□ 0.73
PHGDH-220ENST00000641570 NEO1Q92859 1461 aa19.63■□□□□ 0.73
PHGDH-220ENST00000641570 MYT1LQ9UL68 1186 aa19.62■□□□□ 0.73
PHGDH-220ENST00000641570 CAMSAP2Q08AD1 1489 aa19.61■□□□□ 0.73
PHGDH-220ENST00000641570 KIF13AQ9H1H9 1805 aa19.61■□□□□ 0.73
PHGDH-220ENST00000641570 PTPN23Q9H3S7 1636 aa19.61■□□□□ 0.73
PHGDH-220ENST00000641570 ADGRL1O94910 1474 aa19.6■□□□□ 0.73
PHGDH-220ENST00000641570 AKNAQ7Z591 1439 aa19.6■□□□□ 0.73
PHGDH-220ENST00000641570 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
PHGDH-220ENST00000641570 ITGAEP38570 1179 aa19.59■□□□□ 0.73
PHGDH-220ENST00000641570 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
PHGDH-220ENST00000641570 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-220ENST00000641570 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
PHGDH-220ENST00000641570 TSPY4P0CV99 314 aa19.57■□□□□ 0.72
PHGDH-220ENST00000641570 TSPY10P0CW01 314 aa19.57■□□□□ 0.72
PHGDH-220ENST00000641570 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
PHGDH-220ENST00000641570 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
PHGDH-220ENST00000641570 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
PHGDH-220ENST00000641570 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
PHGDH-220ENST00000641570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHGDH-220ENST00000641570 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-220ENST00000641570 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.721e-6■■■■□ 22.8
PHGDH-220ENST00000641570 SYCP2Q9BX26 1530 aa19.54■□□□□ 0.72
PHGDH-220ENST00000641570 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
PHGDH-220ENST00000641570 ABCC1P33527 1531 aa19.53■□□□□ 0.72
PHGDH-220ENST00000641570 DENND4BO75064 1496 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-220ENST00000641570 CCDC141Q6ZP82 1450 aa19.52■□□□□ 0.72
PHGDH-220ENST00000641570 ZNF518AQ6AHZ1 1483 aa19.5■□□□□ 0.71
PHGDH-220ENST00000641570 SPAG9O60271 1321 aaKnown RBP19.49■□□□□ 0.71
PHGDH-220ENST00000641570 DAPK1P53355 1430 aa19.47■□□□□ 0.71
PHGDH-220ENST00000641570 POGZQ7Z3K3 1410 aa19.47■□□□□ 0.71
PHGDH-220ENST00000641570 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
PHGDH-220ENST00000641570 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
PHGDH-220ENST00000641570 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
PHGDH-220ENST00000641570 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
PHGDH-220ENST00000641570 C9orf84Q5VXU9 1444 aa19.43■□□□□ 0.7
PHGDH-220ENST00000641570 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
PHGDH-220ENST00000641570 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
PHGDH-220ENST00000641570 KDM6BO15054 1643 aa19.43■□□□□ 0.7
PHGDH-220ENST00000641570 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
PHGDH-220ENST00000641570 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
PHGDH-220ENST00000641570 SHANK2Q9UPX8 1470 aa19.42■□□□□ 0.7
PHGDH-220ENST00000641570 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PHGDH-220ENST00000641570 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
PHGDH-220ENST00000641570 ARHGEF12Q9NZN5 1544 aa19.4■□□□□ 0.7
PHGDH-220ENST00000641570 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
PHGDH-220ENST00000641570 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
PHGDH-220ENST00000641570 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
PHGDH-220ENST00000641570 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
PHGDH-220ENST00000641570 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
PHGDH-220ENST00000641570 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
PHGDH-220ENST00000641570 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
PHGDH-220ENST00000641570 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
PHGDH-220ENST00000641570 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
PHGDH-220ENST00000641570 KDM5CP41229 1560 aa19.33■□□□□ 0.69
PHGDH-220ENST00000641570 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.68
PHGDH-220ENST00000641570 MLH3Q9UHC1 1453 aa19.33■□□□□ 0.68
PHGDH-220ENST00000641570 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
PHGDH-220ENST00000641570 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
PHGDH-220ENST00000641570 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
PHGDH-220ENST00000641570 ZMYM4Q5VZL5 1548 aa19.31■□□□□ 0.68
PHGDH-220ENST00000641570 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
PHGDH-220ENST00000641570 FRMPD1Q5SYB0 1578 aa19.28■□□□□ 0.68
PHGDH-220ENST00000641570 INO80Q9ULG1 1556 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-220ENST00000641570 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-220ENST00000641570 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
PHGDH-220ENST00000641570 PTPRKQ15262 1439 aa19.27■□□□□ 0.68
PHGDH-220ENST00000641570 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
PHGDH-220ENST00000641570 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-220ENST00000641570 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
PHGDH-220ENST00000641570 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
PHGDH-220ENST00000641570 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
PHGDH-220ENST00000641570 ARHGEF40Q8TER5 1519 aa19.25■□□□□ 0.67
PHGDH-220ENST00000641570 A2MP01023 1474 aa19.24■□□□□ 0.67
PHGDH-220ENST00000641570 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
PHGDH-220ENST00000641570 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
PHGDH-220ENST00000641570 ATP10AO60312 1499 aa19.23■□□□□ 0.67
PHGDH-220ENST00000641570 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
PHGDH-220ENST00000641570 YEATS2Q9ULM3 1422 aa19.23■□□□□ 0.67
PHGDH-220ENST00000641570 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
PHGDH-220ENST00000641570 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
PHGDH-220ENST00000641570 DIP2CQ9Y2E4 1556 aa19.2■□□□□ 0.66
PHGDH-220ENST00000641570 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
PHGDH-220ENST00000641570 NAIPQ13075 1403 aa19.19■□□□□ 0.66
PHGDH-220ENST00000641570 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
PHGDH-220ENST00000641570 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
PHGDH-220ENST00000641570 KANK1Q14678 1352 aa19.19■□□□□ 0.66
PHGDH-220ENST00000641570 KIF3BO15066 747 aa19.18■□□□□ 0.66
PHGDH-220ENST00000641570 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
PHGDH-220ENST00000641570 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
PHGDH-220ENST00000641570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.665e-16■■□□□ 13.6
PHGDH-220ENST00000641570 GGT6Q6P531 493 aa19.14■□□□□ 0.65
PHGDH-220ENST00000641570 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms