RNA–Protein interactions for RNA: ENST00000641480.1

CASC19-232, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,244 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-232ENST00000641480 PTPRMP28827 1452 aa10.94□□□□□ -0.66
CASC19-232ENST00000641480 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
CASC19-232ENST00000641480 POTEHQ6S545 545 aa10.92□□□□□ -0.66
CASC19-232ENST00000641480 NEO1Q92859 1461 aa10.92□□□□□ -0.66
CASC19-232ENST00000641480 ADAMTSL3P82987 1691 aa10.9□□□□□ -0.66
CASC19-232ENST00000641480 FYCO1Q9BQS8 1478 aa10.9□□□□□ -0.66
CASC19-232ENST00000641480 RAPGEF3O95398 923 aa10.89□□□□□ -0.67
CASC19-232ENST00000641480 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
CASC19-232ENST00000641480 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
CASC19-232ENST00000641480 ABCA9Q8IUA7 1624 aa10.88□□□□□ -0.67
CASC19-232ENST00000641480 SAMD9Q5K651 1589 aa10.88□□□□□ -0.67
CASC19-232ENST00000641480 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
CASC19-232ENST00000641480 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
CASC19-232ENST00000641480 ATP10BO94823 1461 aa10.87□□□□□ -0.67
CASC19-232ENST00000641480 POGZQ7Z3K3 1410 aa10.87□□□□□ -0.67
CASC19-232ENST00000641480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
CASC19-232ENST00000641480 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
CASC19-232ENST00000641480 CASKIN1Q8WXD9 1431 aa10.85□□□□□ -0.67
CASC19-232ENST00000641480 BCORL1Q5H9F3 1711 aa10.85□□□□□ -0.67
CASC19-232ENST00000641480 LMTK3Q96Q04 1460 aa10.85□□□□□ -0.67
CASC19-232ENST00000641480 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
CASC19-232ENST00000641480 ARID3CA6NKF2 412 aa10.83□□□□□ -0.68
CASC19-232ENST00000641480 PPARGC1BQ86YN6 1023 aaKnown RBP10.83□□□□□ -0.68
CASC19-232ENST00000641480 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
CASC19-232ENST00000641480 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
CASC19-232ENST00000641480 DENND4BO75064 1496 aaPredicted RBP10.82□□□□□ -0.68
CASC19-232ENST00000641480 FANCAO15360 1455 aa10.81□□□□□ -0.68
CASC19-232ENST00000641480 LRRC9Q6ZRR7 1453 aa10.81□□□□□ -0.68
CASC19-232ENST00000641480 MADDQ8WXG6 1647 aa10.81□□□□□ -0.68
CASC19-232ENST00000641480 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
CASC19-232ENST00000641480 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
CASC19-232ENST00000641480 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
CASC19-232ENST00000641480 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
CASC19-232ENST00000641480 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
CASC19-232ENST00000641480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
CASC19-232ENST00000641480 ARHGEF40Q8TER5 1519 aa10.79□□□□□ -0.68
CASC19-232ENST00000641480 CCNB3Q8WWL7 1395 aa10.78□□□□□ -0.68
CASC19-232ENST00000641480 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
CASC19-232ENST00000641480 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
CASC19-232ENST00000641480 HSPA2P54652 639 aa10.78□□□□□ -0.68
CASC19-232ENST00000641480 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.69
CASC19-232ENST00000641480 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.69
CASC19-232ENST00000641480 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
CASC19-232ENST00000641480 SOCS7O14512 581 aa10.75□□□□□ -0.69
CASC19-232ENST00000641480 RANGAP1P46060 587 aaPredicted RBP10.75□□□□□ -0.69
CASC19-232ENST00000641480 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
CASC19-232ENST00000641480 ZMYM4Q5VZL5 1548 aa10.74□□□□□ -0.69
CASC19-232ENST00000641480 RICTORQ6R327 1708 aa10.74□□□□□ -0.69
CASC19-232ENST00000641480 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
CASC19-232ENST00000641480 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
CASC19-232ENST00000641480 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
CASC19-232ENST00000641480 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
CASC19-232ENST00000641480 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
CASC19-232ENST00000641480 YEATS2Q9ULM3 1422 aa10.73□□□□□ -0.69
CASC19-232ENST00000641480 MLECQ14165 292 aa10.71□□□□□ -0.69
CASC19-232ENST00000641480 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
CASC19-232ENST00000641480 TTC37Q6PGP7 1564 aa10.7□□□□□ -0.7
CASC19-232ENST00000641480 ATP10AO60312 1499 aa10.7□□□□□ -0.7
CASC19-232ENST00000641480 EFCAB2Q5VUJ9 269 aa10.7□□□□□ -0.7
CASC19-232ENST00000641480 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
CASC19-232ENST00000641480 SCAPERQ9BY12 1400 aa10.69□□□□□ -0.7
CASC19-232ENST00000641480 SETD1BQ9UPS6 1966 aaKnown RBP10.69□□□□□ -0.7
CASC19-232ENST00000641480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
CASC19-232ENST00000641480 PLCH2O75038 1416 aa10.68□□□□□ -0.7
CASC19-232ENST00000641480 FER1L4A9Z1Z3 1794 aa10.68□□□□□ -0.7
CASC19-232ENST00000641480 PREX1Q8TCU6 1659 aa10.68□□□□□ -0.7
CASC19-232ENST00000641480 C9orf84Q5VXU9 1444 aa10.67□□□□□ -0.7
CASC19-232ENST00000641480 UHRF1BP1Q6BDS2 1440 aa10.67□□□□□ -0.7
CASC19-232ENST00000641480 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
CASC19-232ENST00000641480 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
CASC19-232ENST00000641480 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
CASC19-232ENST00000641480 ARHGEF12Q9NZN5 1544 aa10.66□□□□□ -0.7
CASC19-232ENST00000641480 LRRIQ1Q96JM4 1722 aa10.65□□□□□ -0.7
CASC19-232ENST00000641480 ILDR2Q71H61 639 aa10.65□□□□□ -0.7
CASC19-232ENST00000641480 PTPRTO14522 1441 aa10.65□□□□□ -0.7
CASC19-232ENST00000641480 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
CASC19-232ENST00000641480 ZNF518AQ6AHZ1 1483 aa10.64□□□□□ -0.71
CASC19-232ENST00000641480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
CASC19-232ENST00000641480 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
CASC19-232ENST00000641480 IQSEC2Q5JU85 1478 aa10.63□□□□□ -0.71
CASC19-232ENST00000641480 CEBPAP49715 358 aaPredicted RBP10.63□□□□□ -0.71
CASC19-232ENST00000641480 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
CASC19-232ENST00000641480 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
CASC19-232ENST00000641480 MYOM3Q5VTT5 1437 aa10.63□□□□□ -0.71
CASC19-232ENST00000641480 DHX57Q6P158 1386 aaKnown RBP10.63□□□□□ -0.71
CASC19-232ENST00000641480 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
CASC19-232ENST00000641480 MIA2Q96PC5 1412 aa10.61□□□□□ -0.71
CASC19-232ENST00000641480 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
CASC19-232ENST00000641480 TCOF1Q13428 1488 aaKnown RBP10.61□□□□□ -0.71
CASC19-232ENST00000641480 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
CASC19-232ENST00000641480 SIGLEC1Q9BZZ2 1709 aa10.6□□□□□ -0.71
CASC19-232ENST00000641480 STRCQ7RTU9 1775 aa10.6□□□□□ -0.71
CASC19-232ENST00000641480 TRAPPC8Q9Y2L5 1435 aa10.59□□□□□ -0.71
CASC19-232ENST00000641480 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
CASC19-232ENST00000641480 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
CASC19-232ENST00000641480 SPATA31D1Q6ZQQ2 1576 aa10.59□□□□□ -0.71
CASC19-232ENST00000641480 CNTLNQ9NXG0 1405 aa10.58□□□□□ -0.72
CASC19-232ENST00000641480 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.72
CASC19-232ENST00000641480 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
CASC19-232ENST00000641480 FKBP8Q14318 412 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms