RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
RTTN-223ENST00000640931 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
RTTN-223ENST00000640931 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
RTTN-223ENST00000640931 CEP170Q5SW79 1584 aa11.16□□□□□ -0.62
RTTN-223ENST00000640931 FGD1P98174 961 aa11.16□□□□□ -0.62
RTTN-223ENST00000640931 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
RTTN-223ENST00000640931 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
RTTN-223ENST00000640931 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
RTTN-223ENST00000640931 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
RTTN-223ENST00000640931 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
RTTN-223ENST00000640931 KIAA0586Q9BVV6 1533 aa11.13□□□□□ -0.63
RTTN-223ENST00000640931 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
RTTN-223ENST00000640931 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
RTTN-223ENST00000640931 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
RTTN-223ENST00000640931 PTPRKQ15262 1439 aa11.12□□□□□ -0.63
RTTN-223ENST00000640931 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
RTTN-223ENST00000640931 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
RTTN-223ENST00000640931 KIAA0556O60303 1618 aa11.1□□□□□ -0.63
RTTN-223ENST00000640931 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
RTTN-223ENST00000640931 EPRSP07814 1512 aaKnown RBP11.1□□□□□ -0.63
RTTN-223ENST00000640931 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
RTTN-223ENST00000640931 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
RTTN-223ENST00000640931 CHIC2Q9UKJ5 165 aa11.08□□□□□ -0.63
RTTN-223ENST00000640931 PLB1Q6P1J6 1458 aa11.08□□□□□ -0.64
RTTN-223ENST00000640931 SETD5Q9C0A6 1442 aa11.07□□□□□ -0.64
RTTN-223ENST00000640931 SIN3AQ96ST3 1273 aa11.07□□□□□ -0.64
RTTN-223ENST00000640931 AAMPQ13685 434 aa11.06□□□□□ -0.64
RTTN-223ENST00000640931 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
RTTN-223ENST00000640931 NUP160Q12769 1436 aa11.06□□□□□ -0.64
RTTN-223ENST00000640931 HECW1Q76N89 1606 aa11.05□□□□□ -0.64
RTTN-223ENST00000640931 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
RTTN-223ENST00000640931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
RTTN-223ENST00000640931 ZNF644Q9H582 1327 aaPredicted RBP11.05□□□□□ -0.64
RTTN-223ENST00000640931 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
RTTN-223ENST00000640931 MIER1Q8N108 512 aa11.05□□□□□ -0.64
RTTN-223ENST00000640931 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
RTTN-223ENST00000640931 RRP7BPQ9NSQ0 103 aa11.04□□□□□ -0.64
RTTN-223ENST00000640931 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
RTTN-223ENST00000640931 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
RTTN-223ENST00000640931 MAPKBP1O60336 1514 aa11.03□□□□□ -0.64
RTTN-223ENST00000640931 PRG4Q92954 1404 aaPredicted RBP11.03□□□□□ -0.64
RTTN-223ENST00000640931 SUPT6HQ7KZ85 1726 aaKnown RBP11.03□□□□□ -0.64
RTTN-223ENST00000640931 CCDC18Q5T9S5 1454 aa11.02□□□□□ -0.65
RTTN-223ENST00000640931 RAPGEF6Q8TEU7 1601 aa11.01□□□□□ -0.65
RTTN-223ENST00000640931 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
RTTN-223ENST00000640931 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
RTTN-223ENST00000640931 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
RTTN-223ENST00000640931 CHD1O14646 1710 aa11□□□□□ -0.65
RTTN-223ENST00000640931 RBM10P98175 930 aaKnown RBP10.99□□□□□ -0.65
RTTN-223ENST00000640931 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
RTTN-223ENST00000640931 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
RTTN-223ENST00000640931 ZNF777Q9ULD5 760 aaPredicted RBP10.97□□□□□ -0.65
RTTN-223ENST00000640931 A0A0U1RQG5 324 aaPredicted RBP10.97□□□□□ -0.65
RTTN-223ENST00000640931 KDM6BO15054 1643 aa10.97□□□□□ -0.65
RTTN-223ENST00000640931 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.66
RTTN-223ENST00000640931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.66
RTTN-223ENST00000640931 KIF14Q15058 1648 aa10.95□□□□□ -0.66
RTTN-223ENST00000640931 NAIPQ13075 1403 aa10.95□□□□□ -0.66
RTTN-223ENST00000640931 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
RTTN-223ENST00000640931 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
RTTN-223ENST00000640931 ATP10BO94823 1461 aa10.93□□□□□ -0.66
RTTN-223ENST00000640931 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
RTTN-223ENST00000640931 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
RTTN-223ENST00000640931 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
RTTN-223ENST00000640931 PTPRGP23470 1445 aa10.92□□□□□ -0.66
RTTN-223ENST00000640931 ABCA8O94911 1581 aa10.92□□□□□ -0.66
RTTN-223ENST00000640931 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
RTTN-223ENST00000640931 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
RTTN-223ENST00000640931 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
RTTN-223ENST00000640931 ABCC5O15440 1437 aa10.9□□□□□ -0.66
RTTN-223ENST00000640931 CFDP1Q9UEE9 299 aaPredicted RBP10.9□□□□□ -0.66
RTTN-223ENST00000640931 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
RTTN-223ENST00000640931 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
RTTN-223ENST00000640931 DENND4BO75064 1496 aaPredicted RBP10.88□□□□□ -0.67
RTTN-223ENST00000640931 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
RTTN-223ENST00000640931 DAPK1P53355 1430 aa10.88□□□□□ -0.67
RTTN-223ENST00000640931 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
RTTN-223ENST00000640931 RTL5Q5HYW3 569 aaPredicted RBP10.88□□□□□ -0.67
RTTN-223ENST00000640931 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
RTTN-223ENST00000640931 ZNF326Q5BKZ1 582 aaKnown RBP10.86□□□□□ -0.67
RTTN-223ENST00000640931 CAMSAP2Q08AD1 1489 aa10.86□□□□□ -0.67
RTTN-223ENST00000640931 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
RTTN-223ENST00000640931 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
RTTN-223ENST00000640931 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTTN-223ENST00000640931 ABCC10Q5T3U5 1492 aa10.84□□□□□ -0.67
RTTN-223ENST00000640931 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
RTTN-223ENST00000640931 POTEHQ6S545 545 aa10.83□□□□□ -0.68
RTTN-223ENST00000640931 MPHOSPH9Q99550 1183 aa10.83□□□□□ -0.68
RTTN-223ENST00000640931 DNMT1P26358 1616 aaKnown RBP10.82□□□□□ -0.68
RTTN-223ENST00000640931 RSPH4AQ5TD94 716 aa10.82□□□□□ -0.68
RTTN-223ENST00000640931 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
RTTN-223ENST00000640931 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
RTTN-223ENST00000640931 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
RTTN-223ENST00000640931 GCC2Q8IWJ2 1684 aa10.81□□□□□ -0.68
RTTN-223ENST00000640931 ADCY10Q96PN6 1610 aa10.81□□□□□ -0.68
RTTN-223ENST00000640931 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
RTTN-223ENST00000640931 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
RTTN-223ENST00000640931 FKBP8Q14318 412 aa10.81□□□□□ -0.68
RTTN-223ENST00000640931 CDC42BPAQ5VT25 1732 aa10.8□□□□□ -0.68
RTTN-223ENST00000640931 BCANQ96GW7 911 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms