RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 RIMS1Q86UR5 1692 aaKnown RBP19.16■□□□□ 0.66
ERGIC3-220ENST00000640748 SCAPERQ9BY12 1400 aa19.16■□□□□ 0.66
ERGIC3-220ENST00000640748 KIF14Q15058 1648 aa19.11■□□□□ 0.65
ERGIC3-220ENST00000640748 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
ERGIC3-220ENST00000640748 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
ERGIC3-220ENST00000640748 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
ERGIC3-220ENST00000640748 FBXO41Q8TF61 875 aa19.09■□□□□ 0.65
ERGIC3-220ENST00000640748 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
ERGIC3-220ENST00000640748 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.64
ERGIC3-220ENST00000640748 HSPA2P54652 639 aa19.07■□□□□ 0.64
ERGIC3-220ENST00000640748 MLECQ14165 292 aa19.07■□□□□ 0.64
ERGIC3-220ENST00000640748 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
ERGIC3-220ENST00000640748 ATP10AO60312 1499 aa19.07■□□□□ 0.64
ERGIC3-220ENST00000640748 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
ERGIC3-220ENST00000640748 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
ERGIC3-220ENST00000640748 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
ERGIC3-220ENST00000640748 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
ERGIC3-220ENST00000640748 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
ERGIC3-220ENST00000640748 KDM5CP41229 1560 aa19.02■□□□□ 0.64
ERGIC3-220ENST00000640748 FER1L4A9Z1Z3 1794 aa19.02■□□□□ 0.64
ERGIC3-220ENST00000640748 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
ERGIC3-220ENST00000640748 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.63
ERGIC3-220ENST00000640748 CLIP1P30622 1438 aa19■□□□□ 0.63
ERGIC3-220ENST00000640748 CASKIN1Q8WXD9 1431 aa18.98■□□□□ 0.63
ERGIC3-220ENST00000640748 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
ERGIC3-220ENST00000640748 CEBPAP49715 358 aaPredicted RBP18.96■□□□□ 0.63
ERGIC3-220ENST00000640748 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
ERGIC3-220ENST00000640748 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
ERGIC3-220ENST00000640748 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
ERGIC3-220ENST00000640748 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
ERGIC3-220ENST00000640748 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
ERGIC3-220ENST00000640748 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
ERGIC3-220ENST00000640748 ABCC1P33527 1531 aa18.93■□□□□ 0.62
ERGIC3-220ENST00000640748 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
ERGIC3-220ENST00000640748 PREX1Q8TCU6 1659 aa18.89■□□□□ 0.61
ERGIC3-220ENST00000640748 FYCO1Q9BQS8 1478 aa18.88■□□□□ 0.61
ERGIC3-220ENST00000640748 AGLP35573 1532 aa18.88■□□□□ 0.61
ERGIC3-220ENST00000640748 ITSN2Q9NZM3 1697 aa18.88■□□□□ 0.61
ERGIC3-220ENST00000640748 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
ERGIC3-220ENST00000640748 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
ERGIC3-220ENST00000640748 CERKQ8TCT0 537 aa18.86■□□□□ 0.61
ERGIC3-220ENST00000640748 KIDINS220Q9ULH0 1771 aa18.85■□□□□ 0.61
ERGIC3-220ENST00000640748 STRCQ7RTU9 1775 aa18.83■□□□□ 0.61
ERGIC3-220ENST00000640748 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.6
ERGIC3-220ENST00000640748 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.6
ERGIC3-220ENST00000640748 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
ERGIC3-220ENST00000640748 C3P01024 1663 aa18.82■□□□□ 0.6
ERGIC3-220ENST00000640748 SETD1BQ9UPS6 1966 aaKnown RBP18.8■□□□□ 0.6
ERGIC3-220ENST00000640748 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
ERGIC3-220ENST00000640748 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
ERGIC3-220ENST00000640748 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
ERGIC3-220ENST00000640748 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
ERGIC3-220ENST00000640748 KIAA1107Q9UPP5 1409 aa18.75■□□□□ 0.59
ERGIC3-220ENST00000640748 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
ERGIC3-220ENST00000640748 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
ERGIC3-220ENST00000640748 PTPRTO14522 1441 aa18.73■□□□□ 0.59
ERGIC3-220ENST00000640748 ESF1Q9H501 851 aaKnown RBP18.72■□□□□ 0.59
ERGIC3-220ENST00000640748 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-220ENST00000640748 ATP7AQ04656 1500 aa18.72■□□□□ 0.59
ERGIC3-220ENST00000640748 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-220ENST00000640748 PLXNC1O60486 1568 aa18.71■□□□□ 0.59
ERGIC3-220ENST00000640748 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
ERGIC3-220ENST00000640748 NPATQ14207 1427 aa18.7■□□□□ 0.58
ERGIC3-220ENST00000640748 PLEKHH2Q8IVE3 1493 aa18.7■□□□□ 0.58
ERGIC3-220ENST00000640748 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
ERGIC3-220ENST00000640748 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
ERGIC3-220ENST00000640748 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
ERGIC3-220ENST00000640748 A2MP01023 1474 aa18.68■□□□□ 0.58
ERGIC3-220ENST00000640748 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-220ENST00000640748 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
ERGIC3-220ENST00000640748 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
ERGIC3-220ENST00000640748 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
ERGIC3-220ENST00000640748 LTBP4Q8N2S1 1624 aa18.66■□□□□ 0.58
ERGIC3-220ENST00000640748 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
ERGIC3-220ENST00000640748 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
ERGIC3-220ENST00000640748 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
ERGIC3-220ENST00000640748 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
ERGIC3-220ENST00000640748 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
ERGIC3-220ENST00000640748 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
ERGIC3-220ENST00000640748 GGT6Q6P531 493 aa18.6■□□□□ 0.57
ERGIC3-220ENST00000640748 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
ERGIC3-220ENST00000640748 ADGBQ8N7X0 1667 aa18.58■□□□□ 0.57
ERGIC3-220ENST00000640748 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
ERGIC3-220ENST00000640748 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
ERGIC3-220ENST00000640748 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
ERGIC3-220ENST00000640748 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
ERGIC3-220ENST00000640748 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
ERGIC3-220ENST00000640748 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
ERGIC3-220ENST00000640748 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
ERGIC3-220ENST00000640748 IQSEC2Q5JU85 1478 aa18.55■□□□□ 0.56
ERGIC3-220ENST00000640748 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
ERGIC3-220ENST00000640748 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
ERGIC3-220ENST00000640748 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
ERGIC3-220ENST00000640748 PKD2Q13563 968 aa18.51■□□□□ 0.55
ERGIC3-220ENST00000640748 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
ERGIC3-220ENST00000640748 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
ERGIC3-220ENST00000640748 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
ERGIC3-220ENST00000640748 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
ERGIC3-220ENST00000640748 DISP3Q9P2K9 1392 aa18.48■□□□□ 0.55
ERGIC3-220ENST00000640748 KIF3BO15066 747 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms