RNA–Protein interactions for RNA: ENST00000640707.1

STRADA-248, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,300 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-248ENST00000640707 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
STRADA-248ENST00000640707 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
STRADA-248ENST00000640707 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
STRADA-248ENST00000640707 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
STRADA-248ENST00000640707 SNPHO15079 494 aa12.65□□□□□ -0.38
STRADA-248ENST00000640707 CC2D2AQ9P2K1 1620 aa12.65□□□□□ -0.38
STRADA-248ENST00000640707 PPP1R37O75864 691 aa12.62□□□□□ -0.39
STRADA-248ENST00000640707 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
STRADA-248ENST00000640707 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
STRADA-248ENST00000640707 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
STRADA-248ENST00000640707 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
STRADA-248ENST00000640707 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
STRADA-248ENST00000640707 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
STRADA-248ENST00000640707 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
STRADA-248ENST00000640707 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
STRADA-248ENST00000640707 KIF3CO14782 793 aa12.48□□□□□ -0.41
STRADA-248ENST00000640707 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
STRADA-248ENST00000640707 EMP3P54852 163 aa12.44□□□□□ -0.42
STRADA-248ENST00000640707 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
STRADA-248ENST00000640707 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
STRADA-248ENST00000640707 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
STRADA-248ENST00000640707 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
STRADA-248ENST00000640707 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
STRADA-248ENST00000640707 HOXB1P14653 301 aaPredicted RBP12.41□□□□□ -0.42
STRADA-248ENST00000640707 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
STRADA-248ENST00000640707 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
STRADA-248ENST00000640707 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
STRADA-248ENST00000640707 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
STRADA-248ENST00000640707 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
STRADA-248ENST00000640707 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
STRADA-248ENST00000640707 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
STRADA-248ENST00000640707 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
STRADA-248ENST00000640707 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
STRADA-248ENST00000640707 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
STRADA-248ENST00000640707 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43
STRADA-248ENST00000640707 CUX2O14529 1486 aa12.34□□□□□ -0.43
STRADA-248ENST00000640707 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
STRADA-248ENST00000640707 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
STRADA-248ENST00000640707 ERBB3P21860 1342 aa12.31□□□□□ -0.44
STRADA-248ENST00000640707 DSG2Q14126 1118 aa12.3□□□□□ -0.44
STRADA-248ENST00000640707 FOXK1P85037 733 aa12.29□□□□□ -0.44
STRADA-248ENST00000640707 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
STRADA-248ENST00000640707 SLC34A2O95436 690 aa12.27□□□□□ -0.45
STRADA-248ENST00000640707 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
STRADA-248ENST00000640707 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
STRADA-248ENST00000640707 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
STRADA-248ENST00000640707 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
STRADA-248ENST00000640707 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
STRADA-248ENST00000640707 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
STRADA-248ENST00000640707 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
STRADA-248ENST00000640707 NUDT7P0C024 238 aa12.23□□□□□ -0.45
STRADA-248ENST00000640707 PDE4AP27815 886 aa12.22□□□□□ -0.45
STRADA-248ENST00000640707 KRTAP3-3Q9BYR6 98 aa12.22□□□□□ -0.45
STRADA-248ENST00000640707 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
STRADA-248ENST00000640707 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
STRADA-248ENST00000640707 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
STRADA-248ENST00000640707 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
STRADA-248ENST00000640707 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
STRADA-248ENST00000640707 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
STRADA-248ENST00000640707 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
STRADA-248ENST00000640707 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
STRADA-248ENST00000640707 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
STRADA-248ENST00000640707 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
STRADA-248ENST00000640707 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
STRADA-248ENST00000640707 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
STRADA-248ENST00000640707 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
STRADA-248ENST00000640707 TBC1D12O60347 775 aa12.12□□□□□ -0.47
STRADA-248ENST00000640707 HRCP23327 699 aa12.12□□□□□ -0.47
STRADA-248ENST00000640707 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
STRADA-248ENST00000640707 MYT1Q01538 1121 aa12.11□□□□□ -0.47
STRADA-248ENST00000640707 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
STRADA-248ENST00000640707 MFSD10Q14728 455 aa12.1□□□□□ -0.47
STRADA-248ENST00000640707 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
STRADA-248ENST00000640707 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
STRADA-248ENST00000640707 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
STRADA-248ENST00000640707 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
STRADA-248ENST00000640707 AXIN2Q9Y2T1 843 aa12.02□□□□□ -0.49
STRADA-248ENST00000640707 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
STRADA-248ENST00000640707 NCAPD3P42695 1498 aa11.99□□□□□ -0.49
STRADA-248ENST00000640707 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
STRADA-248ENST00000640707 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
STRADA-248ENST00000640707 EVI5O60447 810 aa11.96□□□□□ -0.49
STRADA-248ENST00000640707 PBX2P40425 430 aa11.95□□□□□ -0.5
STRADA-248ENST00000640707 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.5
STRADA-248ENST00000640707 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
STRADA-248ENST00000640707 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
STRADA-248ENST00000640707 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
STRADA-248ENST00000640707 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
STRADA-248ENST00000640707 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
STRADA-248ENST00000640707 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
STRADA-248ENST00000640707 PSEN2P49810 448 aa11.91□□□□□ -0.5
STRADA-248ENST00000640707 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
STRADA-248ENST00000640707 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
STRADA-248ENST00000640707 FOSBP53539 338 aa11.88□□□□□ -0.51
STRADA-248ENST00000640707 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
STRADA-248ENST00000640707 DPYSL4O14531 572 aa11.87□□□□□ -0.51
STRADA-248ENST00000640707 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
STRADA-248ENST00000640707 NESP48681 1621 aa11.86□□□□□ -0.51
STRADA-248ENST00000640707 E2F4Q16254 413 aa11.86□□□□□ -0.51
STRADA-248ENST00000640707 KCNH8Q96L42 1107 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms