RNA–Protein interactions for RNA: ENST00000640368.1

PAX6-270, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,975 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-270ENST00000640368 MSNP26038 577 aaKnown RBP10.89□□□□□ -0.67
PAX6-270ENST00000640368 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
PAX6-270ENST00000640368 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
PAX6-270ENST00000640368 MSH5O43196 834 aa10.86□□□□□ -0.67
PAX6-270ENST00000640368 MCCP23508 829 aa10.86□□□□□ -0.67
PAX6-270ENST00000640368 RASSF8Q8NHQ8 419 aa10.86□□□□□ -0.67
PAX6-270ENST00000640368 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
PAX6-270ENST00000640368 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
PAX6-270ENST00000640368 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
PAX6-270ENST00000640368 SRPK2P78362 688 aaKnown RBP10.85□□□□□ -0.67
PAX6-270ENST00000640368 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
PAX6-270ENST00000640368 HSCBQ8IWL3 235 aa10.84□□□□□ -0.67
PAX6-270ENST00000640368 GORABQ5T7V8 394 aa10.84□□□□□ -0.67
PAX6-270ENST00000640368 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
PAX6-270ENST00000640368 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
PAX6-270ENST00000640368 CARD11Q9BXL7 1154 aa10.84□□□□□ -0.67
PAX6-270ENST00000640368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
PAX6-270ENST00000640368 STK26Q9P289 416 aa10.83□□□□□ -0.68
PAX6-270ENST00000640368 RAD21O60216 631 aa10.83□□□□□ -0.68
PAX6-270ENST00000640368 MARCH6O60337 910 aa10.82□□□□□ -0.68
PAX6-270ENST00000640368 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
PAX6-270ENST00000640368 CDCA8Q53HL2 280 aa10.82□□□□□ -0.68
PAX6-270ENST00000640368 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
PAX6-270ENST00000640368 CEP89Q96ST8 783 aa10.81□□□□□ -0.68
PAX6-270ENST00000640368 FRAT2O75474 233 aaPredicted RBP10.81□□□□□ -0.68
PAX6-270ENST00000640368 KIAA1211Q6ZU35 1233 aa10.81□□□□□ -0.68
PAX6-270ENST00000640368 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
PAX6-270ENST00000640368 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
PAX6-270ENST00000640368 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
PAX6-270ENST00000640368 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
PAX6-270ENST00000640368 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
PAX6-270ENST00000640368 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
PAX6-270ENST00000640368 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.68
PAX6-270ENST00000640368 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.68
PAX6-270ENST00000640368 FBXW7Q969H0 707 aa10.77□□□□□ -0.68
PAX6-270ENST00000640368 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.68
PAX6-270ENST00000640368 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
PAX6-270ENST00000640368 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
PAX6-270ENST00000640368 TCEAL9Q9UHQ7 104 aa10.76□□□□□ -0.69
PAX6-270ENST00000640368 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
PAX6-270ENST00000640368 AEBP2Q6ZN18 517 aaPredicted RBP10.75□□□□□ -0.69
PAX6-270ENST00000640368 TPM4P67936 248 aa10.75□□□□□ -0.69
PAX6-270ENST00000640368 MEX3CQ5U5Q3 659 aaKnown RBP10.74□□□□□ -0.69
PAX6-270ENST00000640368 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
PAX6-270ENST00000640368 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
PAX6-270ENST00000640368 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
PAX6-270ENST00000640368 NUTM2FA1L443 756 aa10.74□□□□□ -0.69
PAX6-270ENST00000640368 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
PAX6-270ENST00000640368 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
PAX6-270ENST00000640368 MORC1Q86VD1 984 aa10.73□□□□□ -0.69
PAX6-270ENST00000640368 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
PAX6-270ENST00000640368 MS4A1P11836 297 aa10.72□□□□□ -0.69
PAX6-270ENST00000640368 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
PAX6-270ENST00000640368 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
PAX6-270ENST00000640368 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
PAX6-270ENST00000640368 HDGFP51858 240 aaKnown RBP10.72□□□□□ -0.69
PAX6-270ENST00000640368 LTV1Q96GA3 475 aaPredicted RBP10.71□□□□□ -0.69
PAX6-270ENST00000640368 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
PAX6-270ENST00000640368 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
PAX6-270ENST00000640368 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
PAX6-270ENST00000640368 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
PAX6-270ENST00000640368 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
PAX6-270ENST00000640368 SLC4A10Q6U841 1118 aa10.69□□□□□ -0.7
PAX6-270ENST00000640368 CCAR2Q8N163 923 aaKnown RBP10.69□□□□□ -0.7
PAX6-270ENST00000640368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.7
PAX6-270ENST00000640368 SCRIBQ14160 1630 aa10.69□□□□□ -0.7
PAX6-270ENST00000640368 GGT6Q6P531 493 aa10.68□□□□□ -0.7
PAX6-270ENST00000640368 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
PAX6-270ENST00000640368 CALRP27797 417 aaKnown RBP10.68□□□□□ -0.7
PAX6-270ENST00000640368 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
PAX6-270ENST00000640368 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
PAX6-270ENST00000640368 HTATSF1O43719 755 aaKnown RBP10.67□□□□□ -0.7
PAX6-270ENST00000640368 HDGFL2Q7Z4V5 671 aaPredicted RBP10.67□□□□□ -0.7
PAX6-270ENST00000640368 TPM3P06753 285 aa10.66□□□□□ -0.7
PAX6-270ENST00000640368 MFAP1P55081 439 aaKnown RBP10.66□□□□□ -0.7
PAX6-270ENST00000640368 KDM4AO75164 1064 aa10.66□□□□□ -0.7
PAX6-270ENST00000640368 DCAF11Q8TEB1 546 aa10.66□□□□□ -0.7
PAX6-270ENST00000640368 EVA1CP58658 441 aa10.66□□□□□ -0.7
PAX6-270ENST00000640368 KANK1Q14678 1352 aa10.65□□□□□ -0.7
PAX6-270ENST00000640368 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
PAX6-270ENST00000640368 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
PAX6-270ENST00000640368 PTMSP20962 102 aa10.65□□□□□ -0.7
PAX6-270ENST00000640368 TMF1P82094 1093 aa10.65□□□□□ -0.7
PAX6-270ENST00000640368 DHX37Q8IY37 1157 aaKnown RBP10.64□□□□□ -0.71
PAX6-270ENST00000640368 FOSBP53539 338 aa10.64□□□□□ -0.71
PAX6-270ENST00000640368 PCMTD1Q96MG8 357 aaPredicted RBP10.64□□□□□ -0.71
PAX6-270ENST00000640368 CCDC34Q96HJ3 373 aa10.63□□□□□ -0.71
PAX6-270ENST00000640368 RSF1Q96T23 1441 aaPredicted RBP10.63□□□□□ -0.71
PAX6-270ENST00000640368 SF3A1Q15459 793 aaKnown RBP10.63□□□□□ -0.71
PAX6-270ENST00000640368 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
PAX6-270ENST00000640368 FOXD1Q16676 465 aa10.62□□□□□ -0.71
PAX6-270ENST00000640368 SYTL4Q96C24 671 aaPredicted RBP10.62□□□□□ -0.71
PAX6-270ENST00000640368 STK31Q9BXU1 1019 aa10.62□□□□□ -0.71
PAX6-270ENST00000640368 CCDC146Q8IYE0 955 aa10.61□□□□□ -0.71
PAX6-270ENST00000640368 SPAG9O60271 1321 aaKnown RBP10.61□□□□□ -0.71
PAX6-270ENST00000640368 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
PAX6-270ENST00000640368 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
PAX6-270ENST00000640368 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
PAX6-270ENST00000640368 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
PAX6-270ENST00000640368 ZNF771Q7L3S4 317 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms