RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ARHGEF11O15085 1522 aa12.34□□□□□ -0.43
SCARB2-220ENST00000640076 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-220ENST00000640076 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
SCARB2-220ENST00000640076 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.43
SCARB2-220ENST00000640076 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
SCARB2-220ENST00000640076 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.44
SCARB2-220ENST00000640076 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
SCARB2-220ENST00000640076 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
SCARB2-220ENST00000640076 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
SCARB2-220ENST00000640076 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
SCARB2-220ENST00000640076 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 RGL2O15211 777 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
SCARB2-220ENST00000640076 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-220ENST00000640076 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
SCARB2-220ENST00000640076 UHRF1BP1LA0JNW5 1464 aa12.29□□□□□ -0.44
SCARB2-220ENST00000640076 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
SCARB2-220ENST00000640076 ARID3CA6NKF2 412 aa12.27□□□□□ -0.44
SCARB2-220ENST00000640076 MSH5O43196 834 aa12.27□□□□□ -0.44
SCARB2-220ENST00000640076 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.44
SCARB2-220ENST00000640076 SPOCK2Q92563 424 aa12.27□□□□□ -0.44
SCARB2-220ENST00000640076 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
SCARB2-220ENST00000640076 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
SCARB2-220ENST00000640076 ATP10BO94823 1461 aa12.26□□□□□ -0.45
SCARB2-220ENST00000640076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-220ENST00000640076 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
SCARB2-220ENST00000640076 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
SCARB2-220ENST00000640076 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
SCARB2-220ENST00000640076 MTUS2Q5JR59 1369 aa12.22□□□□□ -0.45
SCARB2-220ENST00000640076 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
SCARB2-220ENST00000640076 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-220ENST00000640076 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.45
SCARB2-220ENST00000640076 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.46
SCARB2-220ENST00000640076 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-220ENST00000640076 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
SCARB2-220ENST00000640076 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-220ENST00000640076 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
SCARB2-220ENST00000640076 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
SCARB2-220ENST00000640076 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
SCARB2-220ENST00000640076 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SCARB2-220ENST00000640076 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-220ENST00000640076 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
SCARB2-220ENST00000640076 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
SCARB2-220ENST00000640076 KIF14Q15058 1648 aa12.14□□□□□ -0.47
SCARB2-220ENST00000640076 TRIM26Q12899 539 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-220ENST00000640076 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
SCARB2-220ENST00000640076 ASXL2Q76L83 1435 aa12.12□□□□□ -0.47
SCARB2-220ENST00000640076 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
SCARB2-220ENST00000640076 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
SCARB2-220ENST00000640076 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
SCARB2-220ENST00000640076 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
SCARB2-220ENST00000640076 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
SCARB2-220ENST00000640076 CCNB3Q8WWL7 1395 aa12.07□□□□□ -0.48
SCARB2-220ENST00000640076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
SCARB2-220ENST00000640076 TTC37Q6PGP7 1564 aa12.07□□□□□ -0.48
SCARB2-220ENST00000640076 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
SCARB2-220ENST00000640076 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
SCARB2-220ENST00000640076 ITSN2Q9NZM3 1697 aa12.05□□□□□ -0.48
SCARB2-220ENST00000640076 CDC42BPAQ5VT25 1732 aa12.05□□□□□ -0.48
SCARB2-220ENST00000640076 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
SCARB2-220ENST00000640076 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-220ENST00000640076 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
SCARB2-220ENST00000640076 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
SCARB2-220ENST00000640076 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
SCARB2-220ENST00000640076 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
SCARB2-220ENST00000640076 PTPN23Q9H3S7 1636 aa12.02□□□□□ -0.48
SCARB2-220ENST00000640076 CDC42BPBQ9Y5S2 1711 aa12.01□□□□□ -0.49
SCARB2-220ENST00000640076 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
SCARB2-220ENST00000640076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCARB2-220ENST00000640076 CFDP1Q9UEE9 299 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-220ENST00000640076 HRCP23327 699 aa12.01□□□□□ -0.49
SCARB2-220ENST00000640076 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
SCARB2-220ENST00000640076 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
SCARB2-220ENST00000640076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
SCARB2-220ENST00000640076 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
SCARB2-220ENST00000640076 PLCH2O75038 1416 aa12□□□□□ -0.49
SCARB2-220ENST00000640076 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
SCARB2-220ENST00000640076 ARAP3Q8WWN8 1544 aa11.99□□□□□ -0.49
SCARB2-220ENST00000640076 GLI2P10070 1586 aa11.98□□□□□ -0.49
SCARB2-220ENST00000640076 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-220ENST00000640076 ARHGAP5Q13017 1502 aa11.98□□□□□ -0.49
SCARB2-220ENST00000640076 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
SCARB2-220ENST00000640076 CD109Q6YHK3 1445 aa11.96□□□□□ -0.49
SCARB2-220ENST00000640076 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.49
SCARB2-220ENST00000640076 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-220ENST00000640076 MAP3K4Q9Y6R4 1608 aa11.95□□□□□ -0.5
SCARB2-220ENST00000640076 FAM69CQ0P6D2 419 aa11.95□□□□□ -0.5
SCARB2-220ENST00000640076 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
SCARB2-220ENST00000640076 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
SCARB2-220ENST00000640076 ITGAEP38570 1179 aa11.94□□□□□ -0.5
SCARB2-220ENST00000640076 FANCAO15360 1455 aa11.94□□□□□ -0.5
SCARB2-220ENST00000640076 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
SCARB2-220ENST00000640076 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
SCARB2-220ENST00000640076 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
SCARB2-220ENST00000640076 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
SCARB2-220ENST00000640076 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
SCARB2-220ENST00000640076 ABCC1P33527 1531 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms