RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
TARDBP-231ENST00000639599 KIF14Q15058 1648 aa23.92■■□□□ 1.42
TARDBP-231ENST00000639599 ZMYM4Q5VZL5 1548 aa23.92■■□□□ 1.42
TARDBP-231ENST00000639599 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
TARDBP-231ENST00000639599 MADDQ8WXG6 1647 aa23.91■■□□□ 1.42
TARDBP-231ENST00000639599 MLECQ14165 292 aa23.9■■□□□ 1.42
TARDBP-231ENST00000639599 YEATS2Q9ULM3 1422 aa23.89■■□□□ 1.41
TARDBP-231ENST00000639599 ARHGAP5Q13017 1502 aa23.88■■□□□ 1.41
TARDBP-231ENST00000639599 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
TARDBP-231ENST00000639599 CCDC18Q5T9S5 1454 aa23.85■■□□□ 1.41
TARDBP-231ENST00000639599 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.41
TARDBP-231ENST00000639599 ZNF518AQ6AHZ1 1483 aa23.82■■□□□ 1.4
TARDBP-231ENST00000639599 C9orf84Q5VXU9 1444 aa23.82■■□□□ 1.4
TARDBP-231ENST00000639599 CASKIN1Q8WXD9 1431 aa23.82■■□□□ 1.4
TARDBP-231ENST00000639599 PCF11O94913 1555 aaKnown RBP23.81■■□□□ 1.4
TARDBP-231ENST00000639599 ATP10AO60312 1499 aa23.81■■□□□ 1.4
TARDBP-231ENST00000639599 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
TARDBP-231ENST00000639599 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
TARDBP-231ENST00000639599 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
TARDBP-231ENST00000639599 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
TARDBP-231ENST00000639599 HSPA2P54652 639 aa23.7■■□□□ 1.38
TARDBP-231ENST00000639599 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
TARDBP-231ENST00000639599 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
TARDBP-231ENST00000639599 KDM5CP41229 1560 aa23.67■■□□□ 1.38
TARDBP-231ENST00000639599 FBXO41Q8TF61 875 aa23.67■■□□□ 1.38
TARDBP-231ENST00000639599 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
TARDBP-231ENST00000639599 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
TARDBP-231ENST00000639599 SIGLEC1Q9BZZ2 1709 aa23.65■■□□□ 1.38
TARDBP-231ENST00000639599 PREX2Q70Z35 1606 aa23.65■■□□□ 1.38
TARDBP-231ENST00000639599 ABCC1P33527 1531 aa23.64■■□□□ 1.37
TARDBP-231ENST00000639599 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
TARDBP-231ENST00000639599 TRAPPC8Q9Y2L5 1435 aa23.62■■□□□ 1.37
TARDBP-231ENST00000639599 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
TARDBP-231ENST00000639599 DIP2CQ9Y2E4 1556 aa23.61■■□□□ 1.37
TARDBP-231ENST00000639599 CEBPAP49715 358 aaPredicted RBP23.6■■□□□ 1.37
TARDBP-231ENST00000639599 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
TARDBP-231ENST00000639599 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
TARDBP-231ENST00000639599 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
TARDBP-231ENST00000639599 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
TARDBP-231ENST00000639599 REREQ9P2R6 1566 aa23.56■■□□□ 1.36
TARDBP-231ENST00000639599 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
TARDBP-231ENST00000639599 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
TARDBP-231ENST00000639599 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
TARDBP-231ENST00000639599 PLEKHH2Q8IVE3 1493 aa23.53■■□□□ 1.36
TARDBP-231ENST00000639599 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.367e-7■■□□□ 12.4
TARDBP-231ENST00000639599 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.36
TARDBP-231ENST00000639599 GPATCH8Q9UKJ3 1502 aaKnown RBP23.52■■□□□ 1.36
TARDBP-231ENST00000639599 AGLP35573 1532 aa23.51■■□□□ 1.35
TARDBP-231ENST00000639599 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
TARDBP-231ENST00000639599 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
TARDBP-231ENST00000639599 PREX1Q8TCU6 1659 aa23.5■■□□□ 1.35
TARDBP-231ENST00000639599 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
TARDBP-231ENST00000639599 SAMD9LQ8IVG5 1584 aa23.48■■□□□ 1.35
TARDBP-231ENST00000639599 KIAA1107Q9UPP5 1409 aa23.46■■□□□ 1.35
TARDBP-231ENST00000639599 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
TARDBP-231ENST00000639599 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
TARDBP-231ENST00000639599 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
TARDBP-231ENST00000639599 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
TARDBP-231ENST00000639599 ATP7AQ04656 1500 aa23.41■■□□□ 1.34
TARDBP-231ENST00000639599 A2MP01023 1474 aa23.38■■□□□ 1.33
TARDBP-231ENST00000639599 GGT6Q6P531 493 aa23.37■■□□□ 1.33
TARDBP-231ENST00000639599 C3P01024 1663 aa23.36■■□□□ 1.33
TARDBP-231ENST00000639599 ZMYM3Q14202 1370 aa23.34■■□□□ 1.33
TARDBP-231ENST00000639599 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
TARDBP-231ENST00000639599 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
TARDBP-231ENST00000639599 NPATQ14207 1427 aa23.33■■□□□ 1.32
TARDBP-231ENST00000639599 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
TARDBP-231ENST00000639599 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
TARDBP-231ENST00000639599 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
TARDBP-231ENST00000639599 PTPRTO14522 1441 aa23.28■■□□□ 1.32
TARDBP-231ENST00000639599 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
TARDBP-231ENST00000639599 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
TARDBP-231ENST00000639599 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
TARDBP-231ENST00000639599 RTEL1-TNFRSF6BF6WH68 1400 aa23.26■■□□□ 1.31
TARDBP-231ENST00000639599 MROH2AA6NES4 1674 aa23.26■■□□□ 1.31
TARDBP-231ENST00000639599 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
TARDBP-231ENST00000639599 CCDC141Q6ZP82 1450 aa23.25■■□□□ 1.31
TARDBP-231ENST00000639599 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
TARDBP-231ENST00000639599 NCOA1Q15788 1441 aa23.24■■□□□ 1.31
TARDBP-231ENST00000639599 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
TARDBP-231ENST00000639599 TSPY4P0CV99 314 aa23.23■■□□□ 1.31
TARDBP-231ENST00000639599 TSPY10P0CW01 314 aa23.23■■□□□ 1.31
TARDBP-231ENST00000639599 DHX29Q7Z478 1369 aaKnown RBP23.22■■□□□ 1.31
TARDBP-231ENST00000639599 CAMSAP2Q08AD1 1489 aa23.22■■□□□ 1.31
TARDBP-231ENST00000639599 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
TARDBP-231ENST00000639599 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
TARDBP-231ENST00000639599 KIF3BO15066 747 aa23.21■■□□□ 1.31
TARDBP-231ENST00000639599 VPS8Q8N3P4 1428 aa23.21■■□□□ 1.31
TARDBP-231ENST00000639599 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
TARDBP-231ENST00000639599 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
TARDBP-231ENST00000639599 PTPRKQ15262 1439 aa23.17■■□□□ 1.3
TARDBP-231ENST00000639599 NCKAP5LQ9HCH0 1330 aa23.16■■□□□ 1.3
TARDBP-231ENST00000639599 PKD2Q13563 968 aa23.16■■□□□ 1.3
TARDBP-231ENST00000639599 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
TARDBP-231ENST00000639599 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
TARDBP-231ENST00000639599 APLP2Q06481 763 aa23.14■■□□□ 1.29
TARDBP-231ENST00000639599 MYO3AQ8NEV4 1616 aa23.13■■□□□ 1.29
TARDBP-231ENST00000639599 CEP170BQ9Y4F5 1589 aaPredicted RBP23.13■■□□□ 1.29
TARDBP-231ENST00000639599 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
TARDBP-231ENST00000639599 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms