RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 DNMT1P26358 1616 aaKnown RBP17.92■□□□□ 0.46
PAX6-258ENST00000639548 ATP10BO94823 1461 aa17.92■□□□□ 0.46
PAX6-258ENST00000639548 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
PAX6-258ENST00000639548 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
PAX6-258ENST00000639548 KIF14Q15058 1648 aa17.92■□□□□ 0.46
PAX6-258ENST00000639548 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
PAX6-258ENST00000639548 NAIPQ13075 1403 aa17.9■□□□□ 0.46
PAX6-258ENST00000639548 GLI2P10070 1586 aa17.9■□□□□ 0.46
PAX6-258ENST00000639548 KDM6BO15054 1643 aa17.88■□□□□ 0.45
PAX6-258ENST00000639548 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
PAX6-258ENST00000639548 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
PAX6-258ENST00000639548 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
PAX6-258ENST00000639548 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
PAX6-258ENST00000639548 CROCC2H7BZ55 1655 aa17.84■□□□□ 0.45
PAX6-258ENST00000639548 PPRC1Q5VV67 1664 aaKnown RBP17.84■□□□□ 0.45
PAX6-258ENST00000639548 DAPK1P53355 1430 aa17.84■□□□□ 0.45
PAX6-258ENST00000639548 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.45
PAX6-258ENST00000639548 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
PAX6-258ENST00000639548 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
PAX6-258ENST00000639548 CAMSAP2Q08AD1 1489 aa17.81■□□□□ 0.44
PAX6-258ENST00000639548 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
PAX6-258ENST00000639548 ABCC5O15440 1437 aa17.8■□□□□ 0.44
PAX6-258ENST00000639548 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
PAX6-258ENST00000639548 ADGRL2O95490 1459 aa17.78■□□□□ 0.44
PAX6-258ENST00000639548 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
PAX6-258ENST00000639548 WDR7Q9Y4E6 1490 aa17.77■□□□□ 0.44
PAX6-258ENST00000639548 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
PAX6-258ENST00000639548 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.43
PAX6-258ENST00000639548 ARHGEF5Q12774 1597 aa17.75■□□□□ 0.43
PAX6-258ENST00000639548 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
PAX6-258ENST00000639548 TEX14Q8IWB6 1497 aa17.73■□□□□ 0.43
PAX6-258ENST00000639548 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
PAX6-258ENST00000639548 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
PAX6-258ENST00000639548 KDM4FA0A1W2PPD8 638 aa17.71■□□□□ 0.43
PAX6-258ENST00000639548 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
PAX6-258ENST00000639548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
PAX6-258ENST00000639548 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
PAX6-258ENST00000639548 ZNF644Q9H582 1327 aaPredicted RBP17.67■□□□□ 0.42
PAX6-258ENST00000639548 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 RRP7BPQ9NSQ0 103 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 SAMD9LQ8IVG5 1584 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
PAX6-258ENST00000639548 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
PAX6-258ENST00000639548 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
PAX6-258ENST00000639548 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
PAX6-258ENST00000639548 RSPH4AQ5TD94 716 aa17.64■□□□□ 0.41
PAX6-258ENST00000639548 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
PAX6-258ENST00000639548 DENND4BO75064 1496 aaPredicted RBP17.63■□□□□ 0.41
PAX6-258ENST00000639548 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
PAX6-258ENST00000639548 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PAX6-258ENST00000639548 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
PAX6-258ENST00000639548 CCDC141Q6ZP82 1450 aa17.61■□□□□ 0.41
PAX6-258ENST00000639548 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
PAX6-258ENST00000639548 PLCH2O75038 1416 aa17.57■□□□□ 0.4
PAX6-258ENST00000639548 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
PAX6-258ENST00000639548 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
PAX6-258ENST00000639548 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
PAX6-258ENST00000639548 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
PAX6-258ENST00000639548 PLXNC1O60486 1568 aa17.56■□□□□ 0.4
PAX6-258ENST00000639548 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
PAX6-258ENST00000639548 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
PAX6-258ENST00000639548 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
PAX6-258ENST00000639548 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
PAX6-258ENST00000639548 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
PAX6-258ENST00000639548 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
PAX6-258ENST00000639548 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
PAX6-258ENST00000639548 PZPP20742 1482 aa17.53■□□□□ 0.4
PAX6-258ENST00000639548 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
PAX6-258ENST00000639548 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
PAX6-258ENST00000639548 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
PAX6-258ENST00000639548 ABCC1P33527 1531 aa17.5■□□□□ 0.39
PAX6-258ENST00000639548 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
PAX6-258ENST00000639548 ANKRD30BQ9BXX2 1392 aa17.5■□□□□ 0.39
PAX6-258ENST00000639548 RPRD2Q5VT52 1461 aaKnown RBP17.48■□□□□ 0.39
PAX6-258ENST00000639548 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
PAX6-258ENST00000639548 NEO1Q92859 1461 aa17.46■□□□□ 0.38
PAX6-258ENST00000639548 UNC13BO14795 1591 aa17.46■□□□□ 0.38
PAX6-258ENST00000639548 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
PAX6-258ENST00000639548 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
PAX6-258ENST00000639548 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
PAX6-258ENST00000639548 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
PAX6-258ENST00000639548 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
PAX6-258ENST00000639548 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
PAX6-258ENST00000639548 ERBINQ96RT1 1412 aa17.4■□□□□ 0.38
PAX6-258ENST00000639548 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.38
PAX6-258ENST00000639548 RAPGEF3O95398 923 aa17.39■□□□□ 0.38
PAX6-258ENST00000639548 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
PAX6-258ENST00000639548 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
PAX6-258ENST00000639548 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
PAX6-258ENST00000639548 FANCAO15360 1455 aa17.36■□□□□ 0.37
PAX6-258ENST00000639548 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
PAX6-258ENST00000639548 INO80Q9ULG1 1556 aaPredicted RBP17.35■□□□□ 0.37
PAX6-258ENST00000639548 NUP155O75694 1391 aa17.35■□□□□ 0.37
PAX6-258ENST00000639548 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
PAX6-258ENST00000639548 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.37
PAX6-258ENST00000639548 HECW2Q9P2P5 1572 aa17.31■□□□□ 0.36
PAX6-258ENST00000639548 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
PAX6-258ENST00000639548 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms